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SCN18_14_9_16_R4_B_scaffold_6113_2

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1218..1970

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EY06_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 208.0
  • Bit_score: 213
  • Evalue 2.40e-52
TetR family transcriptional regulator {ECO:0000313|EMBL:AJR25180.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 211.0
  • Bit_score: 216
  • Evalue 4.00e-53
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 208.0
  • Bit_score: 213
  • Evalue 6.70e-53

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCGGGATCACGAAATAGCCACCGAAACCGGGGAACAGGACGATAACGGCAACGCGGGCAACGCGCGATCCGCCGGTTATTCAAGTCCTTCGATCATAGCACGCCGCGATCGCATCCTTGATGAGACTCGCCGGATGATCGGCGAGGTCGGCGTGACCAACCTCAGCATGGACGATGTCGCCAAGCGTGCGAATGTCGCCAAGCGCACGCTCTACAATGCGTTCCAGAGCAAGGAACATCTCGTCGCCTCCGCGATCAGCAAATATATGGAGGATTACGAGCGCAAGATCCATTATTCGAAGGAAGATGCGACGCTCGACTGGATGATCGAGCGCCTCGTCATTGTCGCGCGGCGCAATCTCGAAATCCGTAACTACACGCGCGCGCTGATGAACATCTATTATTCGGCCGATGTCGACCCGGAGATCCGTCAGGCGATCCACGACATCGCCGCGCATTCGCACGAGCCCTGGATTCGCCGGCTCGCCGTGAAGCGCCAGTTCCAGCCGTGGATCGATCCCGACGATCTGATTTCGACCCTCGTGCGCTATCGCTACGCCACCGCCAACGCCTGGACCGAAGGCGAGATTCCCAACGAGAATATGGTGGTGGAAGTCGTCCGCGGCGTGCTGACGGTGATGGCCGGCGCGACGCGCGGCGCGGCGCGCAAGGAGATCGTCGACGCGCTCTCCACGCTCGACCAGCATCCGCTGCTCAAGGAGCATTTCGCGGGGATGGTCGAGAAGAAGTGA
PROTEIN sequence
Length: 251
MRDHEIATETGEQDDNGNAGNARSAGYSSPSIIARRDRILDETRRMIGEVGVTNLSMDDVAKRANVAKRTLYNAFQSKEHLVASAISKYMEDYERKIHYSKEDATLDWMIERLVIVARRNLEIRNYTRALMNIYYSADVDPEIRQAIHDIAAHSHEPWIRRLAVKRQFQPWIDPDDLISTLVRYRYATANAWTEGEIPNENMVVEVVRGVLTVMAGATRGAARKEIVDALSTLDQHPLLKEHFAGMVEKK*