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SCN18_14_9_16_R4_B_scaffold_6142_4

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: 1684..2130

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0A5 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 148.0
  • Bit_score: 176
  • Evalue 1.50e-41
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 148.0
  • Bit_score: 178
  • Evalue 8.30e-43
Transcriptional regulator {ECO:0000313|EMBL:AJP71939.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 148.0
  • Bit_score: 178
  • Evalue 4.10e-42

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGACAGAGACGTTCGGTTTCCTGCTCAGCGATACCTCGCGGCTGATGCGCCGTCGCTTCGACGAGCGTGCGCGCTCGCTCGGCGCGACTCGTGCGCAGTGGAAGGCGCTGTTCGGCCTCAGCCGGCACGAAGGGATCAATCAGGGCGGCCTCGCCGATATCCTCGAGGTCGAGCCGATCACCTTGTGCCGGATGGTCGATCGCCTCGAAGAAGCCGGGCTGGTCGAGCGCCGCCGCGATCCCAACGATCGCCGGGCGTGGCGGCTCTACCTCAGCGACAAGGCCCGCCCGATCCTCGACGAATTGCACGAGACCGGCGCCGAACTCGCCGCGCAGGCACTGCGCGGCATCCCTCAAGAGAAGATAGACCAGCTTTCCGACGCGCTGAACGCCATTCGCCAGAACCTCGCCGAGCTGCCGCATCATAAGGACGCCGCTCATGGCTGA
PROTEIN sequence
Length: 149
MTETFGFLLSDTSRLMRRRFDERARSLGATRAQWKALFGLSRHEGINQGGLADILEVEPITLCRMVDRLEEAGLVERRRDPNDRRAWRLYLSDKARPILDELHETGAELAAQALRGIPQEKIDQLSDALNAIRQNLAELPHHKDAAHG*