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SCN18_25_1_16_R3_B_Nitrosospira_56_5

SCN18_25_1_16_R3_B_unknown_56_5
In projects: SCN18_25_1_16_R3_B  |  scn18_genomes

Consensus taxonomy:

Description

SCN18_25_1_16_R3_B_abawaca_043, was SCN18_25_1_16_R3_B_SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52_56_5

Displaying items 51-100 of 952 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_25_1_16_R3_B_scaffold_8433
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 2201 bp 54.38 4.23 61.06
SCN18_25_1_16_R3_B_scaffold_10577
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1736 bp 56.28 4.67 61.18
SCN18_25_1_16_R3_B_scaffold_9282
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (66.67%)
3 1986 bp 49.70 5.44 61.18
SCN18_25_1_16_R3_B_scaffold_8695
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
4 2129 bp 52.79 4.37 61.30
SCN18_25_1_16_R3_B_scaffold_10392
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1769 bp 53.87 4.75 61.39
SCN18_25_1_16_R3_B_scaffold_11539
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1597 bp 57.92 4.23 61.43
SCN18_25_1_16_R3_B_scaffold_18083
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
1 1040 bp 51.83 4.18 61.44
SCN18_25_1_16_R3_B_scaffold_16358
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1142 bp 50.53 4.99 61.47
SCN18_25_1_16_R3_B_scaffold_8529
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 2173 bp 55.22 4.42 61.57
SCN18_25_1_16_R3_B_scaffold_12611
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1463 bp 52.90 5.13 61.93
SCN18_25_1_16_R3_B_scaffold_12585
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1466 bp 52.66 4.81 62.21
SCN18_25_1_16_R3_B_scaffold_9311
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (75%)
4 1980 bp 54.85 4.92 62.27
SCN18_25_1_16_R3_B_scaffold_15592
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1194 bp 55.61 4.90 62.31
SCN18_25_1_16_R3_B_scaffold_18880
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1001 bp 55.14 4.35 62.34
SCN18_25_1_16_R3_B_scaffold_12219
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1510 bp 52.85 3.97 62.38
SCN18_25_1_16_R3_B_scaffold_10659
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (50%)
2 1725 bp 54.72 5.65 62.43
SCN18_25_1_16_R3_B_scaffold_10921
Class: Betaproteobacteria (66.67%)
3 1686 bp 55.34 3.47 62.46
SCN18_25_1_16_R3_B_scaffold_5491
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (60%)
5 3506 bp 56.99 4.36 62.81
SCN18_25_1_16_R3_B_scaffold_16527
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1132 bp 58.30 4.11 63.07
SCN18_25_1_16_R3_B_scaffold_9383
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (66.67%)
3 1962 bp 56.17 4.20 63.15
SCN18_25_1_16_R3_B_scaffold_6172
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (57.14%)
7 3085 bp 53.42 5.74 63.27
SCN18_25_1_16_R3_B_scaffold_10719
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1715 bp 52.48 4.46 63.32
SCN18_25_1_16_R3_B_scaffold_14456
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1279 bp 60.13 5.75 63.57
SCN18_25_1_16_R3_B_scaffold_7304
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (50%)
4 2568 bp 51.13 5.32 63.79
SCN18_25_1_16_R3_B_scaffold_16882
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1108 bp 54.78 4.33 63.90
SCN18_25_1_16_R3_B_scaffold_13538
Species: Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27 (50%)
2 1364 bp 50.07 3.96 64.00
SCN18_25_1_16_R3_B_scaffold_11861
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
1 1556 bp 55.53 5.40 64.20
SCN18_25_1_16_R3_B_scaffold_9847
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1863 bp 46.97 4.35 64.25
SCN18_25_1_16_R3_B_scaffold_11278
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1633 bp 57.38 6.25 64.30
SCN18_25_1_16_R3_B_scaffold_4454
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
6 4313 bp 56.27 4.90 64.34
SCN18_25_1_16_R3_B_scaffold_14840
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (50%)
2 1251 bp 55.56 6.95 64.51
SCN18_25_1_16_R3_B_scaffold_13678
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1349 bp 52.85 5.11 64.71
SCN18_25_1_16_R3_B_scaffold_11681
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (66.67%)
3 1578 bp 49.56 6.18 64.83
SCN18_25_1_16_R3_B_scaffold_10777
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1706 bp 52.70 6.33 64.89
SCN18_25_1_16_R3_B_scaffold_9151
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 2015 bp 53.65 5.58 64.91
SCN18_25_1_16_R3_B_scaffold_10634
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1728 bp 54.92 5.64 64.93
SCN18_25_1_16_R3_B_scaffold_18438
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
1 1021 bp 56.32 3.53 64.94
SCN18_25_1_16_R3_B_scaffold_17662
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1062 bp 53.30 5.65 64.97
SCN18_25_1_16_R3_B_scaffold_10711
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
5 1716 bp 53.90 5.24 65.21
SCN18_25_1_16_R3_B_scaffold_15662
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1189 bp 53.91 5.55 65.35
SCN18_25_1_16_R3_B_scaffold_8376
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 2216 bp 56.54 5.55 65.39
SCN18_25_1_16_R3_B_scaffold_15259
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
1 1220 bp 61.39 5.04 65.41
SCN18_25_1_16_R3_B_scaffold_9036
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 2042 bp 53.28 4.70 65.52
SCN18_25_1_16_R3_B_scaffold_8574
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 2162 bp 53.61 4.09 65.63
SCN18_25_1_16_R3_B_scaffold_14418
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
3 1282 bp 50.23 4.56 65.76
SCN18_25_1_16_R3_B_scaffold_17057
Class: Betaproteobacteria (66.67%)
3 1098 bp 50.09 3.42 65.85
SCN18_25_1_16_R3_B_scaffold_12234
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (66.67%)
3 1508 bp 55.11 4.38 65.85
SCN18_25_1_16_R3_B_scaffold_17889
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
2 1050 bp 57.33 4.86 66.00
SCN18_25_1_16_R3_B_scaffold_15512
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (100%)
1 1200 bp 46.58 5.25 66.25
SCN18_25_1_16_R3_B_scaffold_8027
Species: SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 (50%)
4 2316 bp 50.09 4.86 66.32
Displaying items 51-100 of 952 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.