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SCN18_10_11_15_R5_B_scaffold_145_30

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(29576..30508)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI0003819791 similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 310.0
  • Bit_score: 334
  • Evalue 6.70e-89
HTH-type transcriptional regulator DmlR {ECO:0000313|EMBL:CEJ14144.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 305.0
  • Bit_score: 459
  • Evalue 2.50e-126
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 292.0
  • Bit_score: 323
  • Evalue 4.40e-86

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGCAGGACTTGAACGACCTCTACCTGTTTGCCGCGGTGGTGCAGCACAAGGGCTTTTCACCGGCCGGCCGGGTCCTCGGCATCCCCAAGTCCAAATTGAGCAAACATGTCGCGCGGCTGGAGGCGCGGCTCGGCGTCCGGCTGATCGAGCGCTCGACGCGGCGTTTCCAGGTCACCGATCTCGGCCAGGAATTCTACGAGCAGTGCCAGCAGGTGCTGGCCGGCGTCGAGGTCGCCGAGGCGCTCGTCGCCAAGGCGCGCGCCGAGCCGCGCGGCGTCGTGCGGCTCGCCTGTCCGCCGGATATCGCCCAGGGCCTGATGGCGCGGATGATGCCGGCTTTCCTGAAGCGCTACCCGGAGGTGCGGGTGCAGATGCTGGTGTCCAACCGGCGGGTCGATCTGATCGAGGAGCGCGTCGACATCGCGTTGCGTGTCCGGACCCGGCTGGACACCGACCCGAACCTGACCATGCGCGTGCTCGGCCAAAGCCGGCTGGTGCTGGTGGCGAGCCCGGATTTCATCGCGCGCCATGGCGGCGGCATCGGTATCGATAGCCTCGGCGGATTGCCGACCCTGACATCGACCGAGCAGGTGCTTCAGGATATCTGGCATCTCACCGGCCCCGACGGGCGCACCGTCCAGGTCGAACATGAACCACGCGTCAGCAGTTCCAGCTTCATGGTGCTGAAACACGCGGCGATCGACGGGATCGGCGTCGCCCTCTTGCCGGAACAGGTGGCCGACGACGCCATCAACGCCGGCACGCTGATCCGCATCCTGCCCGAATGGACCGCGCCACTGGGCACGATCCACCTGGTGTTCACCACCCGCCAGGGCCTGTTGCCGGCGGTGCGCGCGCTGATCGACCACATCGTCCGGGAATATCCGCGCCTGATGCGCGAATGCACAGAGACGCTGCAGATGCCCGCATAG
PROTEIN sequence
Length: 311
MQDLNDLYLFAAVVQHKGFSPAGRVLGIPKSKLSKHVARLEARLGVRLIERSTRRFQVTDLGQEFYEQCQQVLAGVEVAEALVAKARAEPRGVVRLACPPDIAQGLMARMMPAFLKRYPEVRVQMLVSNRRVDLIEERVDIALRVRTRLDTDPNLTMRVLGQSRLVLVASPDFIARHGGGIGIDSLGGLPTLTSTEQVLQDIWHLTGPDGRTVQVEHEPRVSSSSFMVLKHAAIDGIGVALLPEQVADDAINAGTLIRILPEWTAPLGTIHLVFTTRQGLLPAVRALIDHIVREYPRLMRECTETLQMPA*