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SCN18_25_1_16_R2_B_scaffold_2176_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(5074..5529)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, glucose subfamily, IIA subunit n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCE6_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 149.0
  • Bit_score: 183
  • Evalue 1.20e-43
PTS system glucose subfamily transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 149.0
  • Bit_score: 183
  • Evalue 3.50e-44
PTS system, glucose subfamily, IIA subunit {ECO:0000313|EMBL:ADG74260.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 149.0
  • Bit_score: 183
  • Evalue 1.70e-43

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 456
GTGCGGCTCGCGAGCCCCGTGGCCGGGACCGTCCGCGCGCTCGACGCGGTGCCGGACGTCGTGTTCGCGCAGGGGATGGTCGGCCCCGGGGTGGCCGTGGAGCCGGTGCGCACGGCCGTGCAGCACGTCGTGTCGCCAGTGGACGGGGTGGTCGCGGCCCTGCACCCGCACGCCTTCGCCATCCGGGTGTCCGACGAGCGGTCCGTGCTGGTCCACCTCGGCATCGACACCGTGACGCTGGCCGGTGCCGGGTTCGAGCCGCACGTGGCCGCGGGCCAGCAGGTGCGCGCCGGGGAGCGGATCGTCACCTGGTCCCCGCTCGACGTGGCCGCCGGCGGGCACGCGACGATCTGCCCGGTGATCGCGCTCCAGGCGGTGCCCGAGGACGTCCACCTGCTACTAGAGCCGGGGGAGACGGACGCCGCCGGTCAGCCGCTGCTGGACTGGGTCGACTGA
PROTEIN sequence
Length: 152
VRLASPVAGTVRALDAVPDVVFAQGMVGPGVAVEPVRTAVQHVVSPVDGVVAALHPHAFAIRVSDERSVLVHLGIDTVTLAGAGFEPHVAAGQQVRAGERIVTWSPLDVAAGGHATICPVIALQAVPEDVHLLLEPGETDAAGQPLLDWVD*