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SCN18_25_1_16_R2_B_scaffold_2729_6

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(4691..5587)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L5_CLOSV similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 287.0
  • Bit_score: 352
  • Evalue 3.00e-94
ABC transporter, permease protein {ECO:0000313|EMBL:EDS08808.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 287.0
  • Bit_score: 352
  • Evalue 4.20e-94
ABC-type sugar transport systems, permease components similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 290.0
  • Bit_score: 317
  • Evalue 3.00e-84

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGGAACGAGTCAGGGGAACGCCCGCCGGCGACGCGAGTCGTGGGCGGCGGCGCTCTTCATCGGTCCAGACTTGATCGGCTTGGTCGTCTTCGTGCTGCTGCCGATCCTGTTTGCGGTCTACGTGAGCTTCTTCGGCTGGAACCTCATCAGTCCGATGAAGTTCATCGGACTGGCGAACTATCGGCGGCTGGCCACGGACTCGGACTGGTGGCTCTCGATGGGGCGGACGCTGCAGTTCGCGTTTATCTACGTTCCAGTCCTCTTCGCCATCTCGCTGGGCCTCGCCGTGGCATTTACGAAGCTAACGGGCCGCACCTCGGCCGGCTTGAGGTCCGCCTACCTGCTCCCGTTCGCCGTCACCTCCGTGATCGCCTCGACCCTCTGGATGTTCCTCTACCAGGAGAAGACCGGCTACCTCAACGCCTTCCTCAACCTCCTAGGAATCCCCGATCAGCCCTTCATCGGCTCGCCGGCGCAGGCGATGGTGTCTGTCGTGGTCGTTGTCCTTTGGATCAACCTTGGCTATACGTCGATGCTGTTCTTCTCGGCGATCAGGCAAATACCCGCCAGCCTTCTGGAGGCCGCGCGACTCGATGGCGCCAACGGCTGGAAGACCTTCTGGGGCATTACATTCCCGCTCATTCGGCCGACCTCGGTCTTCGTTGTCGTGACGTCCACAATCGCGTCCTTTCAGATCCTCGACATCATCTTGGTCATGACCCGCGGCGGTCCGGCCAACGCGACGCAGGTCGGAGTTCTCTACATTTACAAGCGCTCGTTCGATCAGCTTCAGATGGGCTACGGATCGGCGCTCTCGGTCGTGATGTTCGTGATCCTGCTGGTGATATCCCTGATCCAGTTGCGGTTCACGCGACGCAACAACCTCGAAGGGTGA
PROTEIN sequence
Length: 299
MGTSQGNARRRRESWAAALFIGPDLIGLVVFVLLPILFAVYVSFFGWNLISPMKFIGLANYRRLATDSDWWLSMGRTLQFAFIYVPVLFAISLGLAVAFTKLTGRTSAGLRSAYLLPFAVTSVIASTLWMFLYQEKTGYLNAFLNLLGIPDQPFIGSPAQAMVSVVVVVLWINLGYTSMLFFSAIRQIPASLLEAARLDGANGWKTFWGITFPLIRPTSVFVVVTSTIASFQILDIILVMTRGGPANATQVGVLYIYKRSFDQLQMGYGSALSVVMFVILLVISLIQLRFTRRNNLEG*