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SCN18_25_1_16_R2_B_scaffold_12984_1

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(3..344)

Top 3 Functional Annotations

Value Algorithm Source
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 170
  • Evalue 1.80e-40
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl-diphosphate Delta-isomerase; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 170
  • Evalue 8.70e-40
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E430E1 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 113.0
  • Bit_score: 174
  • Evalue 5.60e-41

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGACCGCGTCGTGCTCGTCTCGCCGACCGGCGACCCGGTCGGCACGGCGCCCAAGTCGACCGTGCACGGGCCGCGGACCCCGCTGCACCTGGCCTTCTCCTGCCACGTGTCGGACGACCACGGGCGCGTTCTCGTCACCCGCCGCGCCCTGGGGAAGGCCACGTGGCCGGGCGTCTGGACGAACGCCTTCTGCGGGCATCCCACCCCCGGCGAGCAGCTCGGGGACGCGGTGCGGCGGCACGCGCGCCGCGAGCTCGGGGTCGAGCTCACGGACCTCGACCTGGTGCTCCCGCACTTCCGCTACCGGGCCGTCGACCCGTCCGGCGTCGTGGAGCACGAG
PROTEIN sequence
Length: 114
MDRVVLVSPTGDPVGTAPKSTVHGPRTPLHLAFSCHVSDDHGRVLVTRRALGKATWPGVWTNAFCGHPTPGEQLGDAVRRHARRELGVELTDLDLVLPHFRYRAVDPSGVVEHE