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SCN18_25_1_16_R2_B_scaffold_12984_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_500_BF_Actinomycetales_73_43_73_7

partial RP 27 / 55 BSCG 31 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1623..2108

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1Z2M9_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 166.0
  • Bit_score: 97
  • Evalue 1.20e-17
Putative membrane protein {ECO:0000313|EMBL:CCH79535.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 166.0
  • Bit_score: 116
  • Evalue 2.80e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 166.0
  • Bit_score: 96
  • Evalue 4.60e-18

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Taxonomy

SCNPILOT_CONT_500_BF_Actinomycetales_73_43 → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTGACCAGCGCGATCCTCTACGCGGCGGTGTACGTCGTCGGCTGGCTGCTGCTCGTGCGGCGGCGGCCCGACGGCCGGCCACCCCGTGTCACCGCCTGGGGTGCCGGCCTCGTCGCGCTCGTGGCGGCGGGCTGGGTCGCGCAGCTGCTGCGGCCGGCGCTCCTCGACCAGGGCATGCGCGAGTCGGCGGCGGTCCGGTCCGGTCAGTGGTGGCGGCTCGCCACGGCGATCGTGCTGCAGGACGGCGGGTGGATCGGCGCGGCGGTGAACCTCGTCGCGCTCGCGGTGACGGTCGGGCTCGCCGGCGAGGTGCTCACGGCGTGGACCGGCCTGCTCGTCGTGCTCCTCGGCGGGATCGCGGCGAACCTGCTCACCGTCCTGACGTTCGGGCAGCCCGGCGCGGGCAGCTCGATGGCGACGATGATCCTTCTCGTGGTGGCCGTGCTCGTCGGGCTGCGGAATCCGTCGTGGCGCGAGGCCGGTCTC
PROTEIN sequence
Length: 162
VTSAILYAAVYVVGWLLLVRRRPDGRPPRVTAWGAGLVALVAAGWVAQLLRPALLDQGMRESAAVRSGQWWRLATAIVLQDGGWIGAAVNLVALAVTVGLAGEVLTAWTGLLVVLLGGIAANLLTVLTFGQPGAGSSMATMILLVVAVLVGLRNPSWREAGL