ggKbase home page

SCN18_25_1_16_R2_B_scaffold_124_14

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(13394..15280)

Top 3 Functional Annotations

Value Algorithm Source
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136N9_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 627.0
  • Bit_score: 1043
  • Evalue 0.0
ABC transporter permease {ECO:0000313|EMBL:KIZ41731.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 627.0
  • Bit_score: 1056
  • Evalue 0.0
TRAP C4-dicarboxylate transport system permease DctM similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 627.0
  • Bit_score: 1043
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGGCTCACGCCGAAGTCAGCGAGACAGCGGCTGGCGCGGAAACCGTTTTTCCGCGTCAGCGTTCGTTTGCGGCATCGTTGGATACATTCCTCGGATATCTCGTCGAAATCCCGGCCGCGGCACTCGTCGTGGCCGAGATCGTCGTGCTGTTCGCGGGCGTCGTGTTTCGCTACGTGCTGCACCAGCCGCTGATCTGGTCGGACGAACTGGCCTCGATCCTGTTCCTGTGGCTTGCGATGCTCGGCGCCGTCGTCGCATTCCGCCGCGCCGAGCATATGCGGATGACGGCGCTGGTCGCGCGCGCAACACCTTCGCAGCAGGCGTTTCTGGACGTGGTCGCAACTTGCGCGGCACTGGCGTTCCTGCTGCTGATCGCCCATCCCTCGTGGGACTACGCCTACGAGGAAAGCTACATCACGACGCCGGCGCTGCAGATTTCCAACATGTGGCGCGCCATAGCGCTGCCGATCGGCGTCGGGCTGATGGCGGTTTTTGCGCTGCTACGGCTGGCACGCACCGGCAATATCCGCATGCTGCTCGGTGCCGCTGCGACTGTCGCGATCATCATTTTCGCGTTCTGGCTGATGCAGCCGTGGCTACGGCCGTTAGGCAATCTGAACCTCGTGATCTTTTTCGTCGGCGTCGCCGGCTTCTGCGTGTTCGCCGGCGTGCCGATCGCATTCGGATTTGGCCTCGCGATCTTCGGCTACCTGGCGCTGACCACGCGGACACCGCTTATGGTGCTGGTCGGCCGGATGGACGAGGGTATGAGCCACCTCATTCTGCTCGCCGTCCCCCTGTTCGTCTTTCTTGGGCTATTGATCGAAATGACCGGCATGGCGCGGGCCATGGTGGCGTTCCTCGCCAGCCTGCTCGGTCATGTGCGCGGCGGTTTGCATTACGTGCTGGTCGGCGCCATGTACCTCGTGTCGGGCATTTCCGGCTCCAAGGCGGCGGACATGGCGGCCGTGGCGCCGGTGCTGTTTCCCGAAATGAAGAAGCGTGGCGCCAAGCCGGGTGATCTCATCGCCCTGCTTGCGGCCACCGGCGCCCAGACTGAGACCATTCCGCCGAGCCTCGTCCTGATCACCATCGGTTCGGTTACCGGCGTTTCCATCGCGGCGCTGTTCACCGGCGGCCTGCTGCCCGGCGTCGTGCTGGCCGTCACGCTTTGCTCGCTGGTGTGGTGGCGCTATCGCGGCGAGGATCTGAGTCACGTCAAAAAGGCCGGGATCGGCCAGATTGCCCGGACCTTCGTCATTGCCCTGCCCGCGCTGGCGCTGCCGTTCGTGATCCGGGCTGCTGTGGTCGAAGGCGTTGCCACGGCCACCGAAGTCTCGACCATCGGCATCGTTTATGCCGTGCTGGCTGGCCTGCTGCTCTACCGGCAGTTCGACTGGCGACGATTGCTGCCGATGCTGATCGACACCGCCTGCCTGTCCGGCGCGATCCTGCTGATCATCGGTACGGCGACCGGCATGGCCTGGGGACTGACCCAGTCCGGCTTCTCGCGGGCGCTGGCGGCGGCGATGACCGGCCTGCCCGGTGGGAGCGCCACCTTCATCGCCGTCTCGATCGTTGCATTCACCATCCTCGGCAGCGTGCTCGAGGGTATCCCGGCCGTGGTGCTGTTCGGGCCGCTGCTGTTTCCCATCGCCAAGGCCGTCGGGGTCCACGAGGTCCACTATGCGATGATCATCATCCTCGCGATGGGTATGGGCTTGTTCGCGCCGCCGTTCGGCGTCGGTTACTATGCGGCCTGCGCCATTGGTCGCGTTGATCCGGCCGAGGGCATCAGGCCAATCTGGGGTTACATGCTGGCGCTGCTGATCGGATTGATCATCGTCGCGGCATTCCCGTGGATTTCGATTGGTTTCTTGAAATAA
PROTEIN sequence
Length: 629
MAHAEVSETAAGAETVFPRQRSFAASLDTFLGYLVEIPAAALVVAEIVVLFAGVVFRYVLHQPLIWSDELASILFLWLAMLGAVVAFRRAEHMRMTALVARATPSQQAFLDVVATCAALAFLLLIAHPSWDYAYEESYITTPALQISNMWRAIALPIGVGLMAVFALLRLARTGNIRMLLGAAATVAIIIFAFWLMQPWLRPLGNLNLVIFFVGVAGFCVFAGVPIAFGFGLAIFGYLALTTRTPLMVLVGRMDEGMSHLILLAVPLFVFLGLLIEMTGMARAMVAFLASLLGHVRGGLHYVLVGAMYLVSGISGSKAADMAAVAPVLFPEMKKRGAKPGDLIALLAATGAQTETIPPSLVLITIGSVTGVSIAALFTGGLLPGVVLAVTLCSLVWWRYRGEDLSHVKKAGIGQIARTFVIALPALALPFVIRAAVVEGVATATEVSTIGIVYAVLAGLLLYRQFDWRRLLPMLIDTACLSGAILLIIGTATGMAWGLTQSGFSRALAAAMTGLPGGSATFIAVSIVAFTILGSVLEGIPAVVLFGPLLFPIAKAVGVHEVHYAMIIILAMGMGLFAPPFGVGYYAACAIGRVDPAEGIRPIWGYMLALLIGLIIVAAFPWISIGFLK*