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SCN18_25_1_16_R2_B_scaffold_116_159

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(180184..181065)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 293.0
  • Bit_score: 526
  • Evalue 3.20e-147
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 293.0
  • Bit_score: 526
  • Evalue 1.60e-146
Formamidopyrimidine-DNA glycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS48_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 293.0
  • Bit_score: 526
  • Evalue 1.10e-146

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCCGAATTACCCGAAGTTGAGACCGTTCGTCGCGGCCTGCAGCCGGCCATGGAGGGGGCGACCATCGTTCGCGCCGAGACCCGGCGCAAGGACCTGCGGTTTCCCTTCCAGAAGGATTTTGTCGCCCGCCTCGAAGGCCAGACCGTGATCGGGCTCGGACGCCGCGCCAAATATCTGCTCGCGGACCTCGGGTCCGGCGACGTGCTGTTGATGCATCTCGGCATGTCCGGCTCGTTCCGTGTGGTCGAGGGGGTGGACAGCACCACGCCCGGCGATTTTCACTATCCCCGCAACGAGGATCGTGCCCACGATCATGTGATGTTTCAGATGTCGTCGGGCGCCGCGGTGGTGTTCAACGATCCGCGCCGCTTCGGCTACATGAAGGTCATTGCCCGCAAGGGCCTCGACGACGAGCCGCTGCTGAAGGGGCTCGGCCCCGAGCCGCTCGGCAACGAGTTCGATGCGGCGATGCTGTCGCGGTCATGCTGGAACAAGAAGACCAGCCTGAAGGCCGCGCTGCTCGACCAGCGCGTGGTCGCGGGCCTCGGCAACATCTATGTCTGCGAGGCGCTATTCCGTTCGCACCTGTCGCCGCGCCGCCTCGCCGCGACGCTGGCGACGAAGAAGGGCGAGCCGACGGATCATGCTGGTCGACTGGTCGAAGCGATTCACGGAGTGCTCAATCAGGCGATCAAGGCCGGCGGCTCGTCGCTGCGCGATCATCGGCAGACATCCGGCGAACTCGGCTACTTCCAGCATTCGTTCCAGGTCTACGACCGCGAAGGCGAGAAGTGCCAAACGCCGAAGTGCAAGGGGACGGTGAAGCGGTTCACGCAGAACGGACGCTCGACATTCTGGTGCCCGACTTGCCAGAAATAA
PROTEIN sequence
Length: 294
MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQKDFVARLEGQTVIGLGRRAKYLLADLGSGDVLLMHLGMSGSFRVVEGVDSTTPGDFHYPRNEDRAHDHVMFQMSSGAAVVFNDPRRFGYMKVIARKGLDDEPLLKGLGPEPLGNEFDAAMLSRSCWNKKTSLKAALLDQRVVAGLGNIYVCEALFRSHLSPRRLAATLATKKGEPTDHAGRLVEAIHGVLNQAIKAGGSSLRDHRQTSGELGYFQHSFQVYDREGEKCQTPKCKGTVKRFTQNGRSTFWCPTCQK*