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SCN18_25_1_16_R2_B_scaffold_265_5

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(5100..5819)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Erwinia carotovora RepID=UPI0001A43F6F similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 239.0
  • Bit_score: 142
  • Evalue 3.80e-31
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 236.0
  • Bit_score: 139
  • Evalue 6.90e-31
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 224.0
  • Bit_score: 152
  • Evalue 3.90e-34

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCTGTTCGATCGCACCTCCCGGCCGCCTCGCCTGACCGATGCGGGGCGGATCGTGGTCGATTACGCTCGGCGTATCATCACCGAGTACGACGCCATGCGCGGGGCCCTTTCATTGGGCACAGCCGGCCCGGCGCTTCGAATCGGCGTTATCCCCACCGTGGTGACCACGCTACTCCCTGCAGCCATGATAAGGCTTCAGCAAAACAAGCCTACTCCAAAAATCACGGTGACGACGGCGCTATCCGGTGAATTGTCCGTCGATCGTGGCGTTCTCGACACGGCGCTGATCCATGAGCCTCTGCGTCCGCGCGACGGCTATCTCTGGCAGGAAGTAGCTCGTCAGCAAGTTGTCGTCATTGCCCCGCCCAATTCCGCAGAGACTGACCTGAAGCGGTTGTTCAGTGCACATTCTTATCTGCGCTTCAATCGTGCCGCCTGGGTCGGCTCTCTGATTGAAGAACGGTTGCGCGAACCCGAAATCGCCGTTAGCGAAGTTGCAGAAGTAGAGTCCGTCGACGCAATCAGGCGGTTGGTTGGGAGCGGCTTTGGCGTTTCAATTGTGCCAACCGTTGATCCGATCGGCGTACGAACAATGTCGTTCGGTGAGCCTCCCCTCTATCGGCGTGTCGGCTTCTACATGCGGGAAGGTCTATCGATGCGACCTGCTTTGCGTTCGCTGGTTGATGCGCGTTTGCCGACGCATGTCGAAACGATTTAA
PROTEIN sequence
Length: 240
VLFDRTSRPPRLTDAGRIVVDYARRIITEYDAMRGALSLGTAGPALRIGVIPTVVTTLLPAAMIRLQQNKPTPKITVTTALSGELSVDRGVLDTALIHEPLRPRDGYLWQEVARQQVVVIAPPNSAETDLKRLFSAHSYLRFNRAAWVGSLIEERLREPEIAVSEVAEVESVDAIRRLVGSGFGVSIVPTVDPIGVRTMSFGEPPLYRRVGFYMREGLSMRPALRSLVDARLPTHVETI*