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SCN18_25_1_16_R2_B_scaffold_278_17

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 11098..11625

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPR6_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 278
  • Evalue 3.20e-72
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 278
  • Evalue 9.20e-73
Collagen triple helix repeat protein {ECO:0000313|EMBL:ABA05725.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 278
  • Evalue 4.50e-72

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Taxonomy

Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25 → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
GTGGCAGGTGAAACGCGCGGCAAGCAGGGACCGCAGGGTATCCCCGGCGTTCAGGGATCGCCGGGCCGGACCGGTCCGCAAGGCAAACCGGGACCGCGTGGCGCACCTGGCAAATCCGGCAGTCAGGGTCCGACAGGAAAAGCGGGACCGCAGGGCAAGGCCGGTCTTGACGGCAAGCCAGGCCGCGACGGCAAGCCTGGAGCGAATGGCAAGCCCGGCACAGACGGTAAACCCGGTGTGGATGGCAAGGCAGGACCGCAAGGGCCGCGCGGCGAACAAGGCCCGCCCGGACGGCTGCCGTCGATCGAAGAGGTTCTCCCCTGGATCGAAAAGATCGTTGAAGCCTGGGGCGAGCATCAGCGGCGGCAAACCATCGAGGCCGAGCACCGGCTGCTCGCCGAGCAGCAGCGTATCGACGCCGAGCGCACACTCGCCGAGACCCTGAAGGACGACGACGTGGACGATGGCGACCGGAAAAAGAAGAAGAAAGACAAACGCCGCCGGCGAAAGGACGCCGACGGCGAATAG
PROTEIN sequence
Length: 176
VAGETRGKQGPQGIPGVQGSPGRTGPQGKPGPRGAPGKSGSQGPTGKAGPQGKAGLDGKPGRDGKPGANGKPGTDGKPGVDGKAGPQGPRGEQGPPGRLPSIEEVLPWIEKIVEAWGEHQRRQTIEAEHRLLAEQQRIDAERTLAETLKDDDVDDGDRKKKKKDKRRRRKDADGE*