ggKbase home page

SCN18_25_1_16_R2_B_scaffold_499_9

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(9362..10612)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003620644 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 413.0
  • Bit_score: 602
  • Evalue 3.00e-169
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KJC61130.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 412.0
  • Bit_score: 599
  • Evalue 2.80e-168
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 412.0
  • Bit_score: 575
  • Evalue 1.10e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGACATCGACAAGTATCGAAAGCATTCTGCGCGACGAGGCGGCGCGGGCGCTGGCCACCCTGATCCGCCTCGTCGGCGATTTCGATCTGGCCGAGGACGCGTTGCAGGATGCGTTCGCTGTTGCGTTGGAGCGTTGGCCGCAGGTCGGATCGCCGGCCAATGCGGGTGCCTGGCTGGTCAGCGTCGGACGCAACAAGGCGATCGATCGCGTCCGGCGTCAGGTGAACTTTCACAGCAAGCAGGGCGCGCTCACCCACGAATTGTTGCTGAATGCGTTGCCGGACGACGCCGATGACGAAAGCGGGCCGCTCGACGACGACATGCTGCGGCTGATCTTCACCTGTTGCCATCCGGCGCTCGCGATGGAGACGCGGGTCGCGCTGACGCTGCGCACGGTGTGTGGTTTGACCGTGACGGAGGTGGCGCGCGCATTTCTCGTCGGCGAGGAGGCGATGGCGCAACGCCTCGTGCGCGCGAAGCAGAAGATCCGTCTCGCGGGCATCCCCTACGAGGTGCCCGGGCAGGCTGCCCTCGTTCCGAGACTGACGGGCGTGTTGGCGGTGATCTATCTCGTCTTCACCGAGGGCTACGCTGCGACGTCAGGTGGCGAATTGATGCGCGCCGATCTCGCACGCGAAGCGATCCGGCTGTGTCGTTTGCTGGACAGCCTGATGCCGGAGAGCGGCGAGATCAAGGGACTGCTGGCGCTGATGCTGCTGCACGATGCGCGCCGCGCCGGCCGCGCGACGGCCGGCGGCGACGTCGTGCTGCTGGAGGAACAGGACCGGACGCTGTGGGATCGCGACCAGATCGCCGAAGGCTTGGCGCTTGTCGATGAAGCCCTGCGTGGGCCGGGCCGCCCCGACGTCTACGCTGTTCAGGCTGCGATCGCTGCGCTGCATGCCCGCGCGCGAAGCTATGCGCAAACCGATTGGCCACAGATTGCGGGACTCTACGCGGTGCTGCTGCGGATCAATCCATCGCCGGTGATCGAGCTCAATCATGCCGCCGCGGTGGCGATGGTCGACGGACCTGCGCGCGCGTTGGCGCTGATCGATGCTCTCGAGGCCCGCGGCACGTTACGCGGCTATGAATTGCTGTTCGCGGTGCGTGCCGACTTGCTGCGCCGGCTCGATCGCCATGCCGAGGCTTGCGATGCCTATCGCGCAGCGATCGCGGCAACGCAACTCGAGCCGTCGCGCCGCTTCTACGCGCGCCGGATCGCGGAGCTGGAAGACAGGAACGGCTAG
PROTEIN sequence
Length: 417
MTSTSIESILRDEAARALATLIRLVGDFDLAEDALQDAFAVALERWPQVGSPANAGAWLVSVGRNKAIDRVRRQVNFHSKQGALTHELLLNALPDDADDESGPLDDDMLRLIFTCCHPALAMETRVALTLRTVCGLTVTEVARAFLVGEEAMAQRLVRAKQKIRLAGIPYEVPGQAALVPRLTGVLAVIYLVFTEGYAATSGGELMRADLAREAIRLCRLLDSLMPESGEIKGLLALMLLHDARRAGRATAGGDVVLLEEQDRTLWDRDQIAEGLALVDEALRGPGRPDVYAVQAAIAALHARARSYAQTDWPQIAGLYAVLLRINPSPVIELNHAAAVAMVDGPARALALIDALEARGTLRGYELLFAVRADLLRRLDRHAEACDAYRAAIAATQLEPSRRFYARRIAELEDRNG*