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SCN18_25_1_16_R2_B_scaffold_499_20

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 20922..21563

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89FS6_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 211.0
  • Bit_score: 282
  • Evalue 3.60e-73
TetR family transcriptional regulator {ECO:0000313|EMBL:KJC52865.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 211.0
  • Bit_score: 295
  • Evalue 4.40e-77
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 211.0
  • Bit_score: 282
  • Evalue 1.00e-73

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGTTGCACCCAGACCCGCCCCTCTCGCCGTCGTCGAGACCGACGACAGCTCCAAGCGCCGCCAGATTCTGGACGGCGCGCGGGCGGTGTTCATGGATCTTGGCTTCGACGGCGCGAGCATGGGCGAGATCGCCCGGGCTGCCGGCGTCTCCAAGGGCACACTCTATGTCTATTTCGCCGACAAGAACCGGCTGTTCGAGGCGATCGTGCAGCAGGAGTGCCTCGAGCAGGGCAAGGCCGTCTTCAATTTCGATACCGGACGCGACACCGCGACCACGCTTTCGGAATTCGGCCGCGCCTTCATCCAGGTACTGTGCCGACCCGAAGGAGGATCATCGCTGCGCACCGTGATGGCGATCGCCGAACGGATGCCTGAAGTCGGCCGTCGCTTCTATGATGACGTGATCGCCATGACTATCGGCCGCTTCGCGGCCTATCTCGACAGCCGCTGCGCCGAGGGCGAACTGGCGATCGACGACACCACCCTCGCCGCTTCGCAGTTCATGGAGATGTGCAAGGCGACGCTGTTCCTGCCCTATATCTTCCAGGCCGCCGCCGCACCCTCGTCCGAGCAGATCGCTTATGCGGTCGACAGCGCAACGCGGGTGTTTCTCGCTGCCTATGCCGTGAAGCGGAGCTGA
PROTEIN sequence
Length: 214
MVAPRPAPLAVVETDDSSKRRQILDGARAVFMDLGFDGASMGEIARAAGVSKGTLYVYFADKNRLFEAIVQQECLEQGKAVFNFDTGRDTATTLSEFGRAFIQVLCRPEGGSSLRTVMAIAERMPEVGRRFYDDVIAMTIGRFAAYLDSRCAEGELAIDDTTLAASQFMEMCKATLFLPYIFQAAAAPSSEQIAYAVDSATRVFLAAYAVKRS*