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SCN18_25_1_16_R2_B_scaffold_455_21

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 22741..23640

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPV7_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 298.0
  • Bit_score: 560
  • Evalue 5.60e-157
RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 298.0
  • Bit_score: 560
  • Evalue 1.60e-157
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 298.0
  • Bit_score: 560
  • Evalue 7.80e-157

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGCCCGCACAGCTACCTTGCCGGTTCTCAACGGAGAATCTGGCCTTTCCCATTACCTCGCCGAAATTCGCAAGTTTCCCATGCTGGAACCCCAGCAGGAATACATGCTCGCCAAGCGCTGGCGTGAGCATGACGACCGCGATGCGGCGCATAAGCTCGTCACCAGCCACCTTCGGCTCGTGGCCAAGATCGCCATGGGCTACCGCGGCTACGGCCTGCCGATCTCCGAGGTTGTCTCGGAAGGCAACGTCGGCCTGATGCAGGCGGTGAAGCGGTTCGAGCCCGAAAAGGGCTTCCGTCTTGCCACATACGCTATGTGGTGGATCAAGGCGTCGATTCAAGAATACATCCTGCGTTCGTGGTCGCTCGTGAAGATGGGCACCACCGCGAACCAGAAGAAGCTGTTCTTCAACTTGCGCAAGGCAAAGAGCAAGATTTCGGCGCTCGACGAAGGCGATTTGCGGCCCGATCAGGTGAAGCTGATCGCCAAGCGCCTCGGCGTCACTGACCAGGACGTGGTGGAGATGAATCGCCGTCTCGGCGGCGACGCGTCGCTCAACGCGCCGATCCGCGATGATGGCGAGGCTGGCGAATGGCAGGACTGGCTGGTCGATCAGTCGCCGAGCCAGGAAGCCATCATGGCCGAGCACGAGGAGTTCGATCATCGCCACCAGGCGCTGACCGGCGCCATGGGCGTGCTCAACCCGCGCGAACGCCGCATCTTCGAGGCACGCCGCCTCGCGGATGAGCCGATGACGCTGGAAGATCTCGCCGCCGAGTTCAATGTCTCGCGCGAACGCGTGCGGCAGATCGAGGTGCGCGCCTTCGAGAAGGTGCAGTCGGCCGTGAAGACCACGATCGCACGGCAGGAGCAGGCCGCGCTGGAAGCCGCCTACTAA
PROTEIN sequence
Length: 300
MARTATLPVLNGESGLSHYLAEIRKFPMLEPQQEYMLAKRWREHDDRDAAHKLVTSHLRLVAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPDQVKLIAKRLGVTDQDVVEMNRRLGGDASLNAPIRDDGEAGEWQDWLVDQSPSQEAIMAEHEEFDHRHQALTGAMGVLNPRERRIFEARRLADEPMTLEDLAAEFNVSRERVRQIEVRAFEKVQSAVKTTIARQEQAALEAAY*