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SCN18_13_7_16_R5_B_scaffold_659_4

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: 1632..2249

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD59_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 194.0
  • Bit_score: 238
  • Evalue 4.30e-60
RNA polymerase sigma-70 factor,ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 194.0
  • Bit_score: 238
  • Evalue 1.20e-60
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 200.0
  • Bit_score: 248
  • Evalue 4.50e-63

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCAGCGGCACAATCAGGGCCTGTTCCGGGTTGCGCGCAGCATCGTCGCCGACGAGGCCGAGGCCGAGGATATCCTCCAGGAAAGCTATGTCCGGGCCTTCGCGGCGCTCGATGGCTTCCGCGGCGCGTCCAGCCTGCTGACCTGGCTGACGCGGATCGTCATCAACGAGGCGCGCGGCAGGCTGCGCCGTCGCCGGCGTGCCACGGTCGAACTCGATCAGGTCGAAACAGCGCAGGCGGCGGGGGCCGCCGTCGTCGCCTTTCCCGGAGGACAAGCGATGGACGATCCGGAAGCCGCCATTGCCCGGGCTCAGATCCGCCTGCTGATTGAACGGGCGATCGACGCTCTGCCTGAGCCGTTCCGGCTCGTCTTCATTTTGCGCGAGGTGCAGGAATGCTCGGTCGAGGAGACGGCCGAGCTGACCGGAATTCGCCCCGAGACGGTCAAGACGCGTCTCCATCGCGCACGCCGCCTATTGCGCCTCGCCTTGAACGAAACCCTGGCCTCGACCATGCACGAGACCTTTCCTTTTCTCGGCCGGCGCTGCGAGAGGATCACCGCCGCCGTCCTCGACAGGCTGGCGCCGCTTCAGGGCTGGGAGCCCGGCCCGGGCTGA
PROTEIN sequence
Length: 206
MQRHNQGLFRVARSIVADEAEAEDILQESYVRAFAALDGFRGASSLLTWLTRIVINEARGRLRRRRRATVELDQVETAQAAGAAVVAFPGGQAMDDPEAAIARAQIRLLIERAIDALPEPFRLVFILREVQECSVEETAELTGIRPETVKTRLHRARRLLRLALNETLASTMHETFPFLGRRCERITAAVLDRLAPLQGWEPGPG*