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SCN18_13_7_16_R5_B_scaffold_409_12

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(10812..11693)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 288.0
  • Bit_score: 402
  • Evalue 2.70e-109
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 287.0
  • Bit_score: 327
  • Evalue 2.20e-87
Shikimate dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6H6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 287.0
  • Bit_score: 332
  • Evalue 3.20e-88

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCGGCAAGCGTCAACGCCAGGAAAGCCAAGCGGGTGCTGCTCGGGCTGATCGGCTATCCGATCGCCCATTCGGCGACGCCGGCGATGCAGGAGGCGGCGGCGCGCGCCGCCGGCTTTGAGGCGCATTACCACCTGATCGAGGTCGAAGGTGCGCAACGCGACGACCTCGCTGCCATGCTCGAGGGCGTGCGCCGGCTCGGCTTCTCCGGCATCAACGTCACCTACCCCTACAAGGAGGCGGTCGTGCCGCTGCTCGACGCGCTTGCGCCGGAGGCCGCGGCGATGGGGGCGGTCAACACCATCACCGTCACCGATGGCCGGCTCACCGGGCACAACACCGATGCCAGCGGCTTCGCCACGGCCTATCGCAAGCTCGGCCGGAACGACTGCGACAGGCCGGTCGCGATCATCGGCGCCGGCGGTGTCGGCAAGGCGATCGCCTTCGCGCTGGCCGGCAGCGGCGTCGGGGCCTTGCGGCTCTACGACATCGACCGCGGCAAATGCGAGGCCCTGGCGCAGATGCTCGCCGGCCGCGCCCGAATCGAGATCGCGGCCAGTGCGGCTGCGGCCGCGGAGGGCGCCGCCGGCATCGTCAACGGCACGCCGCTCGGCATGGCGCCGAACCGCGAAATGCCGCTGCCGGCCGGCGTTCTACGAGCATCGCAATGGGTCGCCGATTCCGTCTACCATCCGCTCTGGACACCGCTCATGAAGGCTGCGCAAAGCATTGGCGCGACGGTGATGAGCGGGCGCGAGCTCGCCATCAACCAGGCTCTCGACGCCTTCGCGCTGTTCACCGGCGCCGAAGCGTCGGAAAGCGCGATGAGCCGCGCGTTCGACGCCGCGATGGCAGAGCGCGCCGGCGAGCATGCGGCATAA
PROTEIN sequence
Length: 294
MPASVNARKAKRVLLGLIGYPIAHSATPAMQEAAARAAGFEAHYHLIEVEGAQRDDLAAMLEGVRRLGFSGINVTYPYKEAVVPLLDALAPEAAAMGAVNTITVTDGRLTGHNTDASGFATAYRKLGRNDCDRPVAIIGAGGVGKAIAFALAGSGVGALRLYDIDRGKCEALAQMLAGRARIEIAASAAAAAEGAAGIVNGTPLGMAPNREMPLPAGVLRASQWVADSVYHPLWTPLMKAAQSIGATVMSGRELAINQALDAFALFTGAEASESAMSRAFDAAMAERAGEHAA*