ggKbase home page

SCN18_13_7_16_R5_B_scaffold_3693_6

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(3429..3785)

Top 3 Functional Annotations

Value Algorithm Source
TRAP C4-dicarboxylate transport system permease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IH40_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 196
  • Evalue 1.10e-47
dctM; TRAP C4-dicarboxylate transporter permease similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 196
  • Evalue 3.10e-48
TRAP C4-dicarboxylate transport system permease {ECO:0000313|EMBL:BAF86168.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 116.0
  • Bit_score: 196
  • Evalue 1.50e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
CCCTCGCCGCACATGCCCGTGCTGGCGCTGCCCGTGATGTACATCATCCTGGGTTGCCTGCACGACGGCATCTCGATGATCGTGCTGACCGCCGTCATCGTCCTGCCCATGGTCAAGGAGGCCGGCTTCGACCTCGTCTGGTTCGGCGTCTACCTCGTCATCCATGTCGAGATGGCGCAGATCACCCCGCCGGTCGGCTTCAACCTGTTCGTGCTGCAGAACATGAGCGGCAAGGACACCTGGACGGTTGCGAGGGCCGCCTTCCCGTTCTTCATTCTGCTCAACGTCGCCGTGCTGATCATCACGACCTTCCCGCAGATCGTGCTCTATTTGCCGAAGCTCGCCTTCCCGGATTGA
PROTEIN sequence
Length: 119
PSPHMPVLALPVMYIILGCLHDGISMIVLTAVIVLPMVKEAGFDLVWFGVYLVIHVEMAQITPPVGFNLFVLQNMSGKDTWTVARAAFPFFILLNVAVLIITTFPQIVLYLPKLAFPD*