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SCN18_13_7_16_R5_B_scaffold_5035_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(2..199)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 2.00e-25
2-isopropylmalate synthase n=1 Tax=Afipia birgiae RepID=UPI0002F35137 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 6.10e-24
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 112
  • Evalue 2.50e-23

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGACCGTCTCCAATAATGCTTCGTCGAAGGATCGCGTCCTGATCTTCGACACCACCCTGCGCGATGGCGAGCAGTGCCCCGGCGCGACCATGACCTTCGAGGAGAAGCTCGAGGTTGCCGACGTGCTGGACGCGATGGGCGTCGACGTGATCGAGGCCGGCTTCCCGATCGCCTCCGACGGCGATTTCGAGGCGGTC
PROTEIN sequence
Length: 66
MTVSNNASSKDRVLIFDTTLRDGEQCPGATMTFEEKLEVADVLDAMGVDVIEAGFPIASDGDFEAV