ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_13_7_16_R5_B_scaffold_8628_1

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(10..252)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMP9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 72.0
  • Bit_score: 107
  • Evalue 5.90e-21
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58039.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 72.0
  • Bit_score: 107
  • Evalue 8.30e-21
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 72.0
  • Bit_score: 97
  • Evalue 1.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ATGTCGGATCTCGAACGCGGCGAGCGGCTGCAGATCATGCTCAGCGCCGAGGAACTGCGTGCCGTCGAGAACTGGCGCTTCGAGAAGCGCATGCCGAGCCGAGCGGCCGCGGTGCGCGAATTGCTGCGCCGCGGCCTGCTCGCCGAGGGCTTTACCGCCGCGGGCGAAGGCGTGCGTTCCGGCAGTTTCGGCGTGGTCGACAAAAGCGGTGCCAACGATTCACTGGACAAGGACGAGGCCTAG
PROTEIN sequence
Length: 81
MSDLERGERLQIMLSAEELRAVENWRFEKRMPSRAAAVRELLRRGLLAEGFTAAGEGVRSGSFGVVDKSGANDSLDKDEA*