ggKbase home page

SCN18_10_11_15_R4_B_scaffold_100_29

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(32123..33847)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU02_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 539.0
  • Bit_score: 463
  • Evalue 3.00e-127
cyclohexanecarboxylate-CoA ligase similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 539.0
  • Bit_score: 463
  • Evalue 8.60e-128
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 545.0
  • Bit_score: 470
  • Evalue 2.70e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1725
ATGAGCGGCGGCATTGCCATTGTCGAAGACGGGAAGGCGGGGTCGGCGGACCGCGCCCGCTCCGCCGCGCGCGACGCCGCTTCCGGGACCGACGGCATCGCCTTCCCGCCGGACGTGATTGCGGACTACGTGTCGGCCGGTCTCTGGTGCCAGCGCGACATTTTCGGCCTGCTTGAGGACGCCGCCGCGCGCAGTCCGGCCAAGACGCTGATCGTCGACCGCTCTGGCCGGCTGGACTATGCGACTGCGCTGCGGCAGGCCGAACTGATCGCGCGCAACCTGGTGTCGCTCGGCGTGCGGCCCGGCGACCGCGTCGCCGTGCAGCTTCCCAACTGGCGGCACTTCCCGCTGCTCGAATATGCGGCTCCGCGGCTTGGCGCGATCATGGTCCCGCTGCCGCCGATCTACCGCGAGCGCGAGCTGCGGCTGATGCTGAAGATCGCCGAGCCGGTCGTGGCGGTCTGCCCCGGCCTGTTCCGCGGCTTCGACCATGCGGCGATGTTTCGCGAGCTGCGCGCCGGGCTGCCCTGCATCCGCCATCTGGTCGTCGTGGACGACGAGGCGCCGGCTGGCGCGCTGCCCTTCGAGCGTCTGCTCGCGCCCTGTGAGGCGGACCTGCCGCCGCCGCCCGACCCGAACGCCGTCGTCGAGCTCGCCTTCACCTCCGGCACCACCGGCGAGCCGAAAGGCGTGACGCACACCTCCAACACGATCCTGAGCACGCTGACCAACCTCGTCGCCGACCAGAGACTCGGCGCCGACACCGTGATCCTCATGGCGTCAACCTTCGGCCACCAGACCGGCTTCGCCTTCGGCGGCCAGCTTCCGGTCCTGCTCGGCGGCACCGTCGTGCTCATGGACCGCTGGGAGGCTAAGGAGGGCGTCGCCCTCATCGACCGCGAGAAGGCCACATGGATGATGGGCGCGACGCCCTTCCTGCAGGACGTGGTCGAGGCCGTGGAGGCCGGGCACGGCCATTGCCGCAGCCTCGGCATTTTCCTGTGCTCGGGCGCGCCGGTGCCGCGGCCGCTGCTCGAAAGGGCCAACGAGGTCTTGCGCGCCAGGGTCGTCTCCGGCTGGGGCATGACCGAGGTCGGCCTCGCCACGCTGACCCGGATCGACGACGAACCGGCAAGGATCGTCGGCTCGGACGGGCGGGCGCTGGCTGGCATGGCCGTCCGCGTCGTCGACGCGCGGGGCCGTCCGGTTCCCGCCGACACGGAAGGCGAGCTGCAATGCCGCGGCCCGGCGGTCTTCGCCGGCTACTGGCGCCGGCCCGAGCTGACGGCGGCGAGCTTCGCCGGCGGCACGGTCGCCGAGGGCGGCTGGCTGCGCACCGGCGACCGCGCGCGCCGCGACGCCGACGGCTACATCCGCATCACCGGCCGCAGCAAGGACATCATCGTGCGCGGCGGCGAGAACATCCCCGTCGTCGAGGTCGAGGACCTGCTGCACAAGCACCCGGACGTGCTGCGGGTGGCGATCGTCGCCGTTCCCGACCCGCGCCTACAGGAGCGCGCCTGCGCGGTGGTCGTGCTGCGCGCAGGCGCCACCTTCGATCTCGAAAGGATGCGCGCGTTCCTCGAAACGGCGCGGCTGGCGCGCACCTATTTCCCGGAACATCTGGTGGTCACGGACGCGTTGCCGATGACCCCCAGCGGCAAGGTCCAGAAGTTCCTGCTGCGCAAGATGGTGCTGGAGAAGATCGGGGTCGCCGATGCGTGA
PROTEIN sequence
Length: 575
MSGGIAIVEDGKAGSADRARSAARDAASGTDGIAFPPDVIADYVSAGLWCQRDIFGLLEDAAARSPAKTLIVDRSGRLDYATALRQAELIARNLVSLGVRPGDRVAVQLPNWRHFPLLEYAAPRLGAIMVPLPPIYRERELRLMLKIAEPVVAVCPGLFRGFDHAAMFRELRAGLPCIRHLVVVDDEAPAGALPFERLLAPCEADLPPPPDPNAVVELAFTSGTTGEPKGVTHTSNTILSTLTNLVADQRLGADTVILMASTFGHQTGFAFGGQLPVLLGGTVVLMDRWEAKEGVALIDREKATWMMGATPFLQDVVEAVEAGHGHCRSLGIFLCSGAPVPRPLLERANEVLRARVVSGWGMTEVGLATLTRIDDEPARIVGSDGRALAGMAVRVVDARGRPVPADTEGELQCRGPAVFAGYWRRPELTAASFAGGTVAEGGWLRTGDRARRDADGYIRITGRSKDIIVRGGENIPVVEVEDLLHKHPDVLRVAIVAVPDPRLQERACAVVVLRAGATFDLERMRAFLETARLARTYFPEHLVVTDALPMTPSGKVQKFLLRKMVLEKIGVADA*