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SCN18_10_11_15_R4_B_scaffold_100_72

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(84156..85082)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVP1_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 307.0
  • Bit_score: 326
  • Evalue 1.80e-86
naaR; transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 307.0
  • Bit_score: 326
  • Evalue 5.20e-87
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAV93967.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 307.0
  • Bit_score: 326
  • Evalue 2.60e-86

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGTTCGGCTTCACGCTCAAGCAGCTCCGCTACATCGAGGCGGCCGCCCGCACCGGCTCGATCGCCAGCGCGGCGGGCGAGCTCAACATCTCGCAATCCTCCATCACCGCCGCGATCGACAAGTTCGAGGAGGATCTGGGCTACGCCCTGTTCATCCGGGTGCCGGCCAAGGGCATCTCCACGACCCCGTCCGGCGAGGAGGCGATGAAGCTGATCCGCGGCTTCATCGACGGCGCGCGCCACCTTGAAAGCGACATGCGCTCGGTCGGCGGCAAGACGACCGGCACGCTGCGACTCGGCTGCTACGCCACCTCGGCGCCGCAGGTGCTGCCGCGCCTGCTCAAGGGATTCATCCGCGACTATCCGGCGATCTCGATCCAGATCTTCGAGGGCGACCTGCGCTCCGTCACCGAGTTCCTCGAGAACGGCGAGGTCGACATCGCGCTGACCTACGACCTCACGCGGTCCGACCACCAGCGCTTCGAGCCGCTTTTCGAGGCGCCCGCCCATGCGGTGCTGCCGTCCGACGATCCGCTGGCCGAACAGGAGAGCGTGAGCCCGGCCGAGCTGGCGCAGCGCCCGATGGTGCTGCTCGACCTGCCGCGGGCGCGCGAATATTTCATGGAGCTGTTCGCCCATCACGGCCTGACGCCGAGGGTCGTGCACTCGGCCCGCTCGGCCGAGATCGCCCGGGCGCTGGTGGCCGGCGGGTTCGGCTTCACCATCCTCAACATCCGCTACGCCGAGCAGGACGGCACGCGGCAGGACTTCGTCATGCGGCCGATCTCCGACCAGCGCTTCTTCCCGGTGTTCGGCATGGCGTCGATGGCGGATGCGCGCCAGCCGCGCATCGTCGAGGCCTTCCTTGCCCATTGCCGCGAGCTCGCCGCGCAGCGCGTCTTCGACGAGATCGTGGTGCGGCCCTGA
PROTEIN sequence
Length: 309
MFGFTLKQLRYIEAAARTGSIASAAGELNISQSSITAAIDKFEEDLGYALFIRVPAKGISTTPSGEEAMKLIRGFIDGARHLESDMRSVGGKTTGTLRLGCYATSAPQVLPRLLKGFIRDYPAISIQIFEGDLRSVTEFLENGEVDIALTYDLTRSDHQRFEPLFEAPAHAVLPSDDPLAEQESVSPAELAQRPMVLLDLPRAREYFMELFAHHGLTPRVVHSARSAEIARALVAGGFGFTILNIRYAEQDGTRQDFVMRPISDQRFFPVFGMASMADARQPRIVEAFLAHCRELAAQRVFDEIVVRP*