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SCN18_10_11_15_R4_B_scaffold_100_85

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 102695..103225

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE30DF related cluster n=1 Tax=unknown RepID=UPI0003CE30DF similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 299
  • Evalue 1.80e-78
Type VI secretion protein {ECO:0000313|EMBL:ESY06241.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 299
  • Evalue 2.50e-78
type VI secretion protein, vc_a0107 family similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 177.0
  • Bit_score: 298
  • Evalue 8.60e-79

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCCGAGAGCAAAGCAAAGGTCATCGAGCGAAACCGGGCACCGCGCGTGCAGATCGCTTATGACGTGGAACATTACGGCAGCCCGACGACGATCGAGCTGCCCTTCGTCATGGGCGTGATGGCCGACCTGGCGGGCAAGTCGGAGACGAGGGAAGCGCAGAAGACGCTGCAGGAGCGCGGCTTCGTCGAGACGGACGCCGGCCGCTTCCCGAAGTTCATGGAAGCGCTCGGGCCGCGGGTGAAGGCGCGGGTGAAGAACGTGCTGCCGCAGGCCGAGGGCCAGGAGCAGGACGAGGAGCTGGCCGTCGACCTGACGTTCAACAACATGGGCGACTTCGCCCCCGACCGCATCGCCGAGCAGGTGCCGCAGCTCGCCGAGCTCCTGAAGATGCGCCGCCAGCTCGAGGAGCTGCTCGGCTTCATGGACGGGCGCGTCGATGCCGAAAAGCGCATCGCGCAGCTCCTGAACAACGAGCCGCTGCTGGCTCAGATCGCCTCGCAGGCGACCGACGACAAGGCGGGAGAGTAA
PROTEIN sequence
Length: 177
MAESKAKVIERNRAPRVQIAYDVEHYGSPTTIELPFVMGVMADLAGKSETREAQKTLQERGFVETDAGRFPKFMEALGPRVKARVKNVLPQAEGQEQDEELAVDLTFNNMGDFAPDRIAEQVPQLAELLKMRRQLEELLGFMDGRVDAEKRIAQLLNNEPLLAQIASQATDDKAGE*