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SCN18_10_11_15_R4_B_scaffold_223_35

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 38453..39142

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSK4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 229.0
  • Bit_score: 268
  • Evalue 4.40e-69
Putative glycosyltransferase {ECO:0000313|EMBL:GAO39045.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 226.0
  • Bit_score: 302
  • Evalue 3.80e-79
lipopolysaccharide synthesis sugar transferase similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 229.0
  • Bit_score: 230
  • Evalue 3.70e-58

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAAGCGGCTCCTGGACATCGTCGCATCCGCCGCGGGCCTTCTCGTGCTCTCGCCCGTGCTTGCCGTCATCCGCTTCCTCGTCTGGCGGCAGGATCGGCATTCGCCCTTCTACATCGCCGAGCGCGCCGCGCGCGGCGGCGGCTCGTTCCGCATGGTCAAGGTGCGCTCGATGGTCGTCAACGCCGACCGCACCGGCGTCGAATCGACGAGTGCCGCCGACAACCGCATCACCCCGCTCGGCCATTTCATCCGCCGTTGGAAGCTCGACGAGATCACCCAGCTCTGGAACGTGCTGAAGGGCGACATGAGCCTGGTCGGCCCGCGCCCCAACACGCTGCGCGAGGTGGCGAAGTACACGCCCGCCGAGCGCGGCCTGCTTGCCGTGCGCCCCGGCATCACCGATCTCGCCTCGATCGTCTTTTCCGACGAGGGCGACATCCTCAAGGACATGGCCGATCCGGACGACGCCTATGACAAGCTGATCCGGCCCTGGAAGAGCCGGCTCGGGCTGCTCTATGCGAAGAATGCCGGCGTGCTTCTCGACATCCGACTGATGTGGCTCACGATCCTCGCCATCCTCGACAAGCCGAAGGCCCTACGCGGCGTCGGCCGCGAGCTGGTGCGCCTCGGCGCCGAACCCGACCTCGTCGCAGTCGCCCGCCGCGACCGGCCGCTGGCTCCGGCGTGA
PROTEIN sequence
Length: 230
MKRLLDIVASAAGLLVLSPVLAVIRFLVWRQDRHSPFYIAERAARGGGSFRMVKVRSMVVNADRTGVESTSAADNRITPLGHFIRRWKLDEITQLWNVLKGDMSLVGPRPNTLREVAKYTPAERGLLAVRPGITDLASIVFSDEGDILKDMADPDDAYDKLIRPWKSRLGLLYAKNAGVLLDIRLMWLTILAILDKPKALRGVGRELVRLGAEPDLVAVARRDRPLAPA*