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SCN18_10_11_15_R4_B_scaffold_188_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5409..6362)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion protein F n=1 Tax=Rhizobium loti RepID=UPI00036823DC similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 319.0
  • Bit_score: 424
  • Evalue 8.60e-116
Bacterial type II secretion system F domain protein {ECO:0000313|EMBL:AID30374.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 319.0
  • Bit_score: 424
  • Evalue 1.20e-115
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 319.0
  • Bit_score: 417
  • Evalue 2.30e-114

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCAGTCGCTGCTCGACCTTCTTACGGGACTTCGCGCGGCGCCGATGCTGCCGGTGGCGGTGGTATTCCTGCTGGTCGGCTCGGGCGCGCTGCTGTGGCCGACGCTCACGGGAGGCAGCCGCGGCGAGGCGCGCCGGCGCCTGCGCGTCGAGGAGGCGTCGGTCGCGGCCAGGCCTGCGCCGGCCGCGCGCCGCAGGGAGGAGGCGGTGCGCGAGAAGGCGGTCAAGACCGCCCAGGATTTCTACGCCAAGTCCGACCCCGAGAACGTCGCGCGGCTGCGGCTGAAGCTGATCCAGGCCGGCTACATGGACCCCGGCGCGGTCGGCACCTTCTTCCTCGTCCGCTTCGGCGCGCTCGCGGCCTGCGCCGCGCTCGCCTTCCTCGCCGTCACCCTGTTCGGCTCCGAAGCCTCGCCGATGAACCGCGTCGTCTTCATCGGCATGCTGGCGGCCGGCGGCTATTTCGTGCCGGGCTTCTGGCTGTCGCGAAAGGTGTCGGCGCGCATGCGCGAATACCGCAACGGCTTTCCCGACTTCATGGACCTGATGATCGTCTGCTCGGACGCCGGCATGAGCATGGAGGCGGGCATCGAGCGCGTCTCGCGCGAGCTTACCAAGACGCATCCGGCGCTCGCCCAGAACCTCCAGCTCGTCTCGATCGAGCTGCGGGCGGGCAGGGGACTGGACGACGCGCTGAAGTCGCTGGCCGACCGGCTCTCGCTCGACGACGTGCGCTCCTTCGCGACGCTCCTGCAGCAGTCGCGCGAGCTGGGCACCAGCCTGTCGGGCGCGTTGCGCGTGTTCTCCGACGAGATGCGGCACAAGCGCATGGCGCTCGCCGAGGAGAAGGCCCACGCGCTGCCGGCCAAGATGTCGGTGCCGGTCACGGTCTGCATCCTGCCGGTGGTGATGATGATCGCCATCATCCCGATCATCGTGAAGATGAGCGGTTGA
PROTEIN sequence
Length: 318
MQSLLDLLTGLRAAPMLPVAVVFLLVGSGALLWPTLTGGSRGEARRRLRVEEASVAARPAPAARRREEAVREKAVKTAQDFYAKSDPENVARLRLKLIQAGYMDPGAVGTFFLVRFGALAACAALAFLAVTLFGSEASPMNRVVFIGMLAAGGYFVPGFWLSRKVSARMREYRNGFPDFMDLMIVCSDAGMSMEAGIERVSRELTKTHPALAQNLQLVSIELRAGRGLDDALKSLADRLSLDDVRSFATLLQQSRELGTSLSGALRVFSDEMRHKRMALAEEKAHALPAKMSVPVTVCILPVVMMIAIIPIIVKMSG*