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SCN18_10_11_15_R4_B_scaffold_188_104

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 82416..83417

Top 3 Functional Annotations

Value Algorithm Source
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CSK1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 326.0
  • Bit_score: 457
  • Evalue 9.70e-126
Retron-type reverse transcriptase {ECO:0000313|EMBL:EJN11814.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 326.0
  • Bit_score: 457
  • Evalue 1.40e-125
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 336.0
  • Bit_score: 251
  • Evalue 1.70e-64

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCCAAGAAGTACCGCAACCTGATCGGCCGTATCGTGGCCGACGACAACATGCTGGCCGCCTACCGGCGCACGGCTGCCGGCCGGCGTCTCTCGACCGGCTACCTTGAGTTCAAGGAATTCTCGCCGCTCAACCTCGATCGGCTGGCGGCCGACATGGCGAGCGGCGCCTATCGGCCGGGCGCGCAGCGCGAGTTCATGATCTACGACCCGAAGCTCCGGCTGATCTCGGCGCTTCCCTTCCGCGACAGGGTCGCGCAACATGCGGTCTGCCGCGTCATCGAGCCGATCTTCGATGCGACGCTGTTGCCACGCAGCTTTGCATGCCGGAAGGGCAAGGGCACGCATGCCGGCGTCGTCGCGCTGCAGGCCGAATTGCGGCGCCTGACGCGCGACGGCGCGTCGCTCTATGCGCTGAAGACGGACTTCTCCCGCTACTTCGCCTCGATCGAGCGGCCGGTGCTCTGGCGCATGATCGAGGCCAAGATTTCCTGCCGCGCGACGCTGCGCGTCATCGAGGCGATGGTTCCGCGCGAGGGCATCGGCCTGCCGATCGGCAACCTCACCTCGCAGATCCTCGCCAACGTCTATTCCGGCGCCGTCGATCGTCACCTGCAGCAGGGCCTCGGCGAGCGCTGCTGGTATCGCTACATGGACGATCTCGTCGTGCTCGGCCGGTCGGTCGCGCATCTGCGCGCCGTCCGCGACGAGATCGAGCGGCTGGCCCGCGAAGAGCTCGGCCTCCGCTTCTCGAAATGGTCGGTCCAACCGATCAGCCGCGGCGTCAATTTCCTCGGCTACCGCATCTGGCCCCGCCACAAGCTGCTGCGCCGTGACAGCGTCGCCCGCGCCAGGCGCAAGATCGCCCGCTACCGCGCCGCCGGCGACACGGCCCGCCTGGAGCAATTCCTGTCTGCGTGGACAGGCCATGCGTCGTGGGCCGACACGCGCAACCTGCTGGCGAGCCTCGGCGTCGGAGGTCGCGATGGCGCTGCATCCTGA
PROTEIN sequence
Length: 334
MAKKYRNLIGRIVADDNMLAAYRRTAAGRRLSTGYLEFKEFSPLNLDRLAADMASGAYRPGAQREFMIYDPKLRLISALPFRDRVAQHAVCRVIEPIFDATLLPRSFACRKGKGTHAGVVALQAELRRLTRDGASLYALKTDFSRYFASIERPVLWRMIEAKISCRATLRVIEAMVPREGIGLPIGNLTSQILANVYSGAVDRHLQQGLGERCWYRYMDDLVVLGRSVAHLRAVRDEIERLAREELGLRFSKWSVQPISRGVNFLGYRIWPRHKLLRRDSVARARRKIARYRAAGDTARLEQFLSAWTGHASWADTRNLLASLGVGGRDGAAS*