ggKbase home page

SCN18_10_11_15_R4_B_scaffold_357_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(19124..22366)

Top 3 Functional Annotations

Value Algorithm Source
helicase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B46E0 similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 1081.0
  • Bit_score: 1516
  • Evalue 0.0
Helicase {ECO:0000313|EMBL:ESY79641.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 1129.0
  • Bit_score: 1484
  • Evalue 0.0
DNA/RNA helicase, superfamily II similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 1128.0
  • Bit_score: 1483
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3243
ATGATAATCGACGTGCCCTGCCTCCCCGCCGGGCCAGAAGGGCCGCCCTCCGCCGCAATGAACATCCAGACCACACAGGCCAGCCCGCTGATCGTGTCGGGCCGCGACGTGACGGCGGTGCTAGGCCCCACCAACACCGGCAAGACGCATCTCGCCATCGAGCGCATGGTGGCGCACCAGAGCGGGCTGATCGGCCTGCCACTCCGGCTGCTCGCGCGCGAGGTCTATGGCCGCGTGGCCGAGAAGGTCGGGCTCGCCAACGTCGCGCTGGTGACGGGCGAGGAGAAGATCGTGCCGCCCGGCGCCCGCTACACGGTCTCGACCGTCGAGGCGATGCCGCGCCAGACGGACGCCGCCTTCGTTGCCATCGACGAGGTGCAGCTCGCCGCCGATTTCGAGCGCGGCCACATCTTCACCGACCGCATCCTGCACCTGCGCGGCCGGCAGGAGACGCTGCTGCTCGGCGCCGGCACCATGCAGGGCATCCTGCAGAAGCTGCTGCGCGGCCTGTCGGTGGTGACGCGGCCGCGGCTGTCGCATCTGGCCTATGCCGGCTCGAAGAAGCTGACGCGGCTGCCGCGCCGCTCGGCCATCGTCGCCTTCTCGGCCGACGAGGTCTACGCGATCGCCGAGCTGATCCGGCGCCAGCGCGGCGGCGCGGCCGTCGTGCTCGGCGCGCTTTCCCCGCGCACCCGCAACGCGCAGGTCGAGATCTACCAGTCGGGCGACGTCGATTATCTGGTGGCGACCGACGCCATCGGCATGGGCCTCAACCTCGACGTCGACCACGTCGCCTTCGCGCAGAACCGCAAGTTCGACGGCTACCAGTATCGCGAGCTGACGGCGGCCGAGCTCGCCCAGATCGCCGGCCGCGCCGGCCGCCACGTGCGCGACGGCACGTTCGGCGTCACCGGCCAGGTCGACCCGTTCCCCGACGATCTCGTCGAGAAGATCGAGGGCCACGAGTTCGAGCCGGCGAGGGTGCTGCAATGGCGCACGGCCGCGTGCGACTTCGCCGGCATCGAGGCGCTGCGGCGCTCGCTCGACGCGCTGCCGCCGATCGAGGGGCTGACCCGCGCCTTGCCGGCGGCCGACCAGACCGCGCTCGACCTCCTGTCGCGCGAGCCCGACGTCGCGGCGCTGGCCGACCGGCCGGAGCGCGTGGCGCTCCTGTGGGACGCCTGCGCGCTGCCCGACTATCGCCGCATCGCGCCGGCGCAGCATGCCGAGCTGGTCGCGGCAATCTTCCAGGACCTGGCGCGGCGCGGCCATGTCGACGCCGACTACATGGCCCAGCAGGTGCGCCGGGCCGATTCGACCGAGGGCGACATCGACGTGCTGTCGGCGCGCATCGCCCAGATCCGCACCTGGACCTTCGTTTCCCACCGGCCCGGCTGGCTGGCCGATCCAACACACTGGCAGGAAAAAACGCGCGATATCGAGGACCGGCTGTCGGATGCGCTGCATGAGCGATTGACGAAACGCTTCGTGGACCGCAGGACATCCGTGCTGATGAAGCGCCTGAGAGAGAACACCATGCTCGAAGCAGAGATCAGTCCGGCCGGCGAGGTTCTCGTCGAAGGCCATCACGTGGGCGAGCTCCAGGGCTTCCGCTTCACCGTCGACCAGGGTGCGGAGGGCGAGGACGCCAAGGCCGTGCGGGCGGCCGCGCAGAAGGCGCTGGCGCGCGAGTTCGAGGCGCGCGCCGACCGCTTCGCGAACGCGCCGAACGGCGATCTGGCGCTCGGATCGGACGGCATCCTGCGCTGGATCGGCGCGCCCGTGGCGACGCTTGTCGCCGGCGAGGACATGCTCAAGCCCCGGCTCGTTCTGCTCGCCGACGAGCAGCTCACCGGCACGCCGCGGGACCGTGTGGCTGCCCGCGCGGAGCGCTACGTCGCCTTCCAGGTCGAGACGCTGCTGAAGCCGCTGGGCGACCTGTCGACCGCGGAGATCCTGAGCGGCATCGCCAAGGGGATCGCCTTCCGGCTGGTCGAGAATTCCGGGCTGGTCAACCGGCGCGACATCGCCGAGGAGGTGCGCTCGCTCGACCAGGACGCGCGCGCGGCGCTGCGACGGCTCGGCGTGCGCTTCGGCGCCTACCACGTCTTCGTGCCGGCGCTGCTGAAGCCCGCGCCGGCCGGGCTGCTGACGCTGCTGTGGGCGCTGAAGAACGACGCCAAGGACAAGCCGGGCTTCGGCGACGTCGTGCACATGCTGGGTTCGGGCCGCACCTCGCTGGTGGTCGACCCGGCCTTCGAGAAGGCCTTCTACAAGCTTGCCGGCTACCGCAATCTCGGCCGCCGCGCGGTGCGCGTCGACATATTGGAGCGGCTCGCCGACCTGATCCGCCCGGCGCTCGCCTGGAAGGAGAACGAGGGCAAGCGGCCGGAGGGCGGCTATGGCGGCGGCGCCTTCGTGGTGACGCCGGCGATGATGTCCATCCTCGGCGCGACCGCCGAGGACATGGAGGAGATCCTCAAGGGCCTCGGCTATCGCGGCGAGCCGAAGCCGGCGGCGGAAGTCGCCGCCCGGATCGAGAGCCTCGACGCGGCGCAGCGGGCGGCGGAGGCGGCGAAGGCGGAAGCCGCGGCCGCGCAGGACCATGGCGGCGAGATGGCCGACCCGAACGTGCCGGCCACGACCGAGGCGAATGCCGAACCGGTGGCGGGCGAGGCCGCGCTGCCGAACGCCGTCGATGCCGACGCCGACCAGCCGGTCGCCGGACCGGACCTGACCGTCGAGCCGGCGGCGCCGGACGAAGCCAATCTCAGCCATCACGACGTCATGGCCGATCCCAACGTCTCGCCCGCGCCGGCGGCCGGGGCGCCGTCGGAGGAGCCGGCCGAGGAGCCGAAGCCGGTGACCGTGTGGCGGCAGGGCCGCTTCGACCGCGGCGGCCGCCCCGGCGAGCGCAACCAGCGGCCCGGCGGCGGCCAGCGCCACGGCGACCGGCGCGGACGCCCCGGCGGCCAGCAGGAGGCCGGCGAGCGCGAGGGCGGCGGACGGCCGCCGCGCCGCTTCGACCGCCACGGGAAGCCGGACGGCAAGCCCGGCGGCCGCGAGGAACGCGGCGAGGGCGGCGGCGAGCAGCGCGGCTTCAAGGGCAAGCGCCCGCCGCGCGAGGGTGGCGGCAAGGACAGGCCGTTCCAGCAGCGGCCGCGCGAGGAGCGTGCGCCCCGGATCGACCCGGACTCGCCCTTCGCCAAGCTCGCCGCGCTGCGCGACCAGCTCAAGAAGTAG
PROTEIN sequence
Length: 1081
MIIDVPCLPAGPEGPPSAAMNIQTTQASPLIVSGRDVTAVLGPTNTGKTHLAIERMVAHQSGLIGLPLRLLAREVYGRVAEKVGLANVALVTGEEKIVPPGARYTVSTVEAMPRQTDAAFVAIDEVQLAADFERGHIFTDRILHLRGRQETLLLGAGTMQGILQKLLRGLSVVTRPRLSHLAYAGSKKLTRLPRRSAIVAFSADEVYAIAELIRRQRGGAAVVLGALSPRTRNAQVEIYQSGDVDYLVATDAIGMGLNLDVDHVAFAQNRKFDGYQYRELTAAELAQIAGRAGRHVRDGTFGVTGQVDPFPDDLVEKIEGHEFEPARVLQWRTAACDFAGIEALRRSLDALPPIEGLTRALPAADQTALDLLSREPDVAALADRPERVALLWDACALPDYRRIAPAQHAELVAAIFQDLARRGHVDADYMAQQVRRADSTEGDIDVLSARIAQIRTWTFVSHRPGWLADPTHWQEKTRDIEDRLSDALHERLTKRFVDRRTSVLMKRLRENTMLEAEISPAGEVLVEGHHVGELQGFRFTVDQGAEGEDAKAVRAAAQKALAREFEARADRFANAPNGDLALGSDGILRWIGAPVATLVAGEDMLKPRLVLLADEQLTGTPRDRVAARAERYVAFQVETLLKPLGDLSTAEILSGIAKGIAFRLVENSGLVNRRDIAEEVRSLDQDARAALRRLGVRFGAYHVFVPALLKPAPAGLLTLLWALKNDAKDKPGFGDVVHMLGSGRTSLVVDPAFEKAFYKLAGYRNLGRRAVRVDILERLADLIRPALAWKENEGKRPEGGYGGGAFVVTPAMMSILGATAEDMEEILKGLGYRGEPKPAAEVAARIESLDAAQRAAEAAKAEAAAAQDHGGEMADPNVPATTEANAEPVAGEAALPNAVDADADQPVAGPDLTVEPAAPDEANLSHHDVMADPNVSPAPAAGAPSEEPAEEPKPVTVWRQGRFDRGGRPGERNQRPGGGQRHGDRRGRPGGQQEAGEREGGGRPPRRFDRHGKPDGKPGGREERGEGGGEQRGFKGKRPPREGGGKDRPFQQRPREERAPRIDPDSPFAKLAALRDQLKK*