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SCN18_10_11_15_R4_B_scaffold_372_22

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(23739..24692)

Top 3 Functional Annotations

Value Algorithm Source
ApbE-like lipoprotein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FUG4_PELBH similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 319.0
  • Bit_score: 406
  • Evalue 1.90e-110
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KJS10117.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 314.0
  • Bit_score: 421
  • Evalue 6.00e-115
ApbE family lipoprotein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 317.0
  • Bit_score: 399
  • Evalue 4.90e-109

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGTCGAAGATGTCTACTGATCTTGTGCGACACGCGCTGAGCGGCCCGACCATGGGCACGCGCTGGTCGGCGCTGTTCTGGGCGAAGCCCGGGTTCGATGTAGCCCAAATCCGCTCCGGCTTGCAGGCTGCCGTCGATGAAGTCGATGCGCAGATGTCGATCTGGAAGACCGACAGCGCTCTGATGCGGCTGAACCGCGCCCCGGTCGGTGAGCCAGTGCCGATACCCGCGATGCTCGAACAGGTCCTCCAACTCGGCGTGGCCATTGGCAAGGCATCCGGCAGTGCATTCGACATGAGCGTGGGCGACGCCGTATCGGCCTGGGGGTTCGGGCCCGCCAGCGCTTCCCTGGATTCAATCCGCGCAGCGATGTCGGCACGCCGCATGTCGGCAGTCGAAGCCCTCGTGTTCGGCCATGGAACCGTGACGAAGCGTACTGCGATCATGCTCGATCTAAATGGGATCGCGAAAGGGTTCGGAGTGGATCGCCTACTCGAAACGCTGTCGGCTCTCGGCGTCCGCGACGCTCTGGTTGGGATCGACGGCGAGATGCGTGCCTTGGGCGGTCGACCGGACGGGCAGCCATGGACGGTCGCGGTGGAAAAGCCCGATCCGGATCGTCGCGCCCCCCATTCGGTCCTCGCCTTGAGCGACTGCGCGGTGGCCACCTCCGGCGACTATCGCCACTTTATCAGCGTTCGGGGACGGCGGCTCTCGCACACGATAGATCCGCAGCGCGGTGCGCCGCTGCTCGAGCCACCTGCATCAGTTACTGTGATCGCGTCTTCATGCGCACTGGCAGACGCCTGGGCCACCGCGCTCATGGTTCTCGGACCCGACGATGGAAGTAGCTTGGCGCGAACCGTCGGCCTCGAAGCCTTGTTCCTGCTGCGCGACGAACGCGATACGGTTCGTGGACGAGGCGTAGGCAATTCATTCGAGCACGCCGCCTAG
PROTEIN sequence
Length: 318
MSKMSTDLVRHALSGPTMGTRWSALFWAKPGFDVAQIRSGLQAAVDEVDAQMSIWKTDSALMRLNRAPVGEPVPIPAMLEQVLQLGVAIGKASGSAFDMSVGDAVSAWGFGPASASLDSIRAAMSARRMSAVEALVFGHGTVTKRTAIMLDLNGIAKGFGVDRLLETLSALGVRDALVGIDGEMRALGGRPDGQPWTVAVEKPDPDRRAPHSVLALSDCAVATSGDYRHFISVRGRRLSHTIDPQRGAPLLEPPASVTVIASSCALADAWATALMVLGPDDGSSLARTVGLEALFLLRDERDTVRGRGVGNSFEHAA*