ggKbase home page

SCN18_10_11_15_R4_B_scaffold_455_26

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 23003..23209

Top 3 Functional Annotations

Value Algorithm Source
Component of type IV pilus, pilin subunit protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CVP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 84
  • Evalue 2.70e-14
Flp pilus assembly protein, pilin Flp {ECO:0000313|EMBL:EDQ35406.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 58.0
  • Bit_score: 83
  • Evalue 1.10e-13
flp; Flp/Fap type IV pilin similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 75
  • Evalue 3.50e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCTGTGCAACGTGTTTCAGGAGCTCAAGATGTCCAATCTGTTCGAACGTTTCGCCAGGGACGAGTCGGGCGCGACCGCCATCGAGTACGGGCTGATCGCCGCCTTGATCGCGCTGGCGATCACCGCCGGCGCGACCACCCTCGGTGGCTCGCTCAGCAACCAGTTCAGCCGCATCGCGGGCAAGCTCGACAACAGCGCGAAGTAA
PROTEIN sequence
Length: 69
MLCNVFQELKMSNLFERFARDESGATAIEYGLIAALIALAITAGATTLGGSLSNQFSRIAGKLDNSAK*