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SCN18_10_11_15_R4_B_scaffold_742_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 798..2075

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 422.0
  • Bit_score: 648
  • Evalue 2.90e-183
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDX28375.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 424.0
  • Bit_score: 651
  • Evalue 8.20e-184
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 425.0
  • Bit_score: 643
  • Evalue 2.60e-182

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACCGACATCGCCTGGATCGACGCCGCGCTCTCTTCCGCCCGCCCGCAGGCGGTGGCGGCGCTGCTGCGCTATTTCCGCGACCTCGACACGGCCGAGGAAGCGTTCCAGGACGCCTGCCTGCGGGCGCTGAAGAACTGGCCGAAGAACGGCCCGCCGCGCGACCCGACGGCGTGGCTGATCTTCGTCGGCCGCAACGCGGCGATCGACCGGGTGCGCAAGACGAGCCGGCAGACCGAGCTGCCGTCCGACGAGGCGATCTCCGACCTCGACGACGTCGAGGCCGGCATGGCCGAGCGGCTCGACAATTCCGACTACCGCGACGACGTGCTGCGGCTCCTGTTCGTCTGCTGCCACCCGGAGCTGCCGGCGACCCAGCAGATCGCGCTGGCGCTGCGCATCGTGTCCGGCCTGTCGGTCGCCCAGATCGCGCGCGCGTTCCTCGTCTCGGAAGCGGCGATGGAGCAGCGCATCACCCGCGCCAAGGGCCGCATCGCGAAGGCCGGCGTGCCGTTCGAGGCGCCCGGCCCGGTCGAGCGCGCGCAGCGGCTCGCCGCCGTCGCGGCGATGGTCTACCTCGTCTTCAACGAGGGCTATTCGGCCAGCGGCGGCGAGCAGCCGGCGCGCGCGCCGCTGTGCGACGAGGCGATCCGGCTGGCGCGGCTGCTCCTGCGGCTGTTCCAGGCCGAGCCGGAGATCATGGGGCTGCTGGCGCTGATGCTCTTGCAGCACGCCCGCCGCGAGGCGCGTTTCGACGCCGACGGCGAGATCGTGCTGCTGGAGGACCAGGACCGGACGCGGTGGAACCGCAAGATGATCCCCGAGGGGCTGGCGCTGGTCGACAAGGCGCTGCGCCACCGCCGGCCCGGCCCCTACCAGGTGCAGGCGGCGATCGCGGCCCTGCACGCGCGGGCGGCACGCGCCGAAGACACCGACTGGCAGGAGATCGACATCCTCTACGCCACGCTGGAGGTGATGCAGCCCTCGCCGGTCATCACGCTCAACCGCTCGGTCGCGGTCTCCAAGACGCGCGGCGCGCAGGCCGCGCTCGACATGGTCGAGCCGCTGGCGGCCAAGCTCGGCAACTACTTCAACTTCCACGGCGTGCGCGGCGCCTACCTGCTCAGGCTCGGCCGGCAGGCCGAGGCGCGCGAGGCCTTCGACCGCGCCATCGCGCTGGCCAACTCGGCCGCCGAGGCCGCCCATATCCGCCAGCATCTCGACCGGCTGATGAAGGACAATGCCGCGGCGGAAAAGCCGGCCGCCGCGAAGAAATAA
PROTEIN sequence
Length: 426
MTDIAWIDAALSSARPQAVAALLRYFRDLDTAEEAFQDACLRALKNWPKNGPPRDPTAWLIFVGRNAAIDRVRKTSRQTELPSDEAISDLDDVEAGMAERLDNSDYRDDVLRLLFVCCHPELPATQQIALALRIVSGLSVAQIARAFLVSEAAMEQRITRAKGRIAKAGVPFEAPGPVERAQRLAAVAAMVYLVFNEGYSASGGEQPARAPLCDEAIRLARLLLRLFQAEPEIMGLLALMLLQHARREARFDADGEIVLLEDQDRTRWNRKMIPEGLALVDKALRHRRPGPYQVQAAIAALHARAARAEDTDWQEIDILYATLEVMQPSPVITLNRSVAVSKTRGAQAALDMVEPLAAKLGNYFNFHGVRGAYLLRLGRQAEAREAFDRAIALANSAAEAAHIRQHLDRLMKDNAAAEKPAAAKK*