ggKbase home page

SCN18_10_11_15_R4_B_scaffold_2208_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4274..5674)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBV8_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 455.0
  • Bit_score: 388
  • Evalue 5.90e-105
Type IV secretory pathway VirD4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 455.0
  • Bit_score: 388
  • Evalue 1.70e-105
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:ABS65501.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 455.0
  • Bit_score: 388
  • Evalue 8.30e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAGCGGGTCCCCGCCGATTTCGCCGGCCGCCGCATCCTCGGCATGACCTTCGAGGGAGAGCCGATCTTTGAGCCCGCCAATGCCGGGGCATCCCTCGTGCTGGCTGCCGCCGGAGGCGGCAAGACGACCTGCGTGACGGTGCCGGCGGTGCAGTGCCTGCTCGCGAGCAGTTCACCGCGAGCCATTCTTATCAATGACGTGAAGGACGGTGAGGTAGCGAGCCAAGTCGGCGCGATGTGCGTGAAACACGGCCGGAAGTTCGGCGCCGTCGATGAGTTCGAGGTTCTCGGCTGCGATTATCCCTTCCGGCTTTCGCTCAACGCCTTCGGCGCCGCCGTAACGGCATTCCGCAACGAGAGTCCGGATCTGCCGTTTATAATCGAGAATATCACGCACGCCCTGATCGACGAGCCCAAGGACGACGAACGCAATTTCTACTGGCGGGAGTCCGCTCGGGAGCGGATCGACTTCGCACTCCGGGCTCTGCTTGACCGCAGCCCCCGCCTCACCTTTCCGGGCGGGCTGCACGCCCTGCTCGCCGACCCGAAACTGTGGTCGCATGCGCTCAAGAACGCTGCCAAGGGAAACGACATATCGCTGGCAGCGCCGGCCAAGCAGATACTGGAGCTGAAGGAACAGAATCCCGAACACGACGCCCAGCATCTCGGTGCGGCGCTGACGGCCACCAAGATGTTCTCCTACGGCCCGCTCGCCAATGCGGGCCGGTTGCCCGATCTCAGCCACGCCGATCTCATCCGCGATGCCTGGGTGGTGTGCTTCGTCAATCCCGTGCGGCACGCCGACAGGCTGGGCCCCTTCTTCGCGCTGCATTTCCTCGCGCTGATGGATGCGCAGTTGCGGGGCGGCGCCGGCGGCGCCGACTACATCCTTGATGAGTTCTGCAACGCTCCGCTGCGCGAGAAACTGAACCGCATCACCATCGAGCGCGGTTTTGGCGCGCGCACAATCTATCTGGCTCAGTCGCGCCAGGACATTGTGCGGCGCTACGGGGAGAAGGAAACTGCAATCCTCGAAGAGAACTGCACGGTCAAGCAGTACCTGAAAATCAGCAATTTCGATGAGGCCTCACGCATCGCGAAGGCAATGGGCGAGGCGCTGCACGTCAGCAGCGGGCTCGGGCTGACCTCGGACAACCAGTCTTTTTCGCGCAACCTCTCGACCGGGCACGGCTGCATGTTTTCGGCCGACGAGCTGATGCGCCTGCCGCCCAACGAGCAGATCATCCATATCGCCGGTCTCGGGTGGATTCATTGCCTGAAAAACCGCCAGAACCAGAATGCTCCCTACTGTTACGACTTGACCGATAACAGGATTGAGGGCGGGCGCTTGCCGCCGGACCCGAAGATTCTCCTTCCGACGCCGGGGCTACGGCCATGA
PROTEIN sequence
Length: 467
MKRVPADFAGRRILGMTFEGEPIFEPANAGASLVLAAAGGGKTTCVTVPAVQCLLASSSPRAILINDVKDGEVASQVGAMCVKHGRKFGAVDEFEVLGCDYPFRLSLNAFGAAVTAFRNESPDLPFIIENITHALIDEPKDDERNFYWRESARERIDFALRALLDRSPRLTFPGGLHALLADPKLWSHALKNAAKGNDISLAAPAKQILELKEQNPEHDAQHLGAALTATKMFSYGPLANAGRLPDLSHADLIRDAWVVCFVNPVRHADRLGPFFALHFLALMDAQLRGGAGGADYILDEFCNAPLREKLNRITIERGFGARTIYLAQSRQDIVRRYGEKETAILEENCTVKQYLKISNFDEASRIAKAMGEALHVSSGLGLTSDNQSFSRNLSTGHGCMFSADELMRLPPNEQIIHIAGLGWIHCLKNRQNQNAPYCYDLTDNRIEGGRLPPDPKILLPTPGLRP*