ggKbase home page

SCN18_26_2_15_R1_P_scaffold_155_3

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2229..3299

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Rhizobium loti RepID=UPI00035EAB47 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 359.0
  • Bit_score: 617
  • Evalue 6.00e-174
Integrase {ECO:0000313|EMBL:CDX22410.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 356.0
  • Bit_score: 622
  • Evalue 2.00e-175
integrase similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 356.0
  • Bit_score: 598
  • Evalue 1.10e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGTCGAACGAAGCTATTCAAGAGGGCGAGCCCTCTGGTCTTTTTGCTGTCTTTTCTTCTCATGCGTCGAATATAAAATACAATTATAGTAAGATCAGGGAAGTAAAGTCGTACAGGATCGGAGAGCTGTTTTCAGCTTACCGGGATATATTGTGGGATGATGGGCGGCATAAATACAATGTCAGCTCCTTCATTGGCGAAATAGACGAGATTCTCCTCGGAGAACGTTTTAGCGCCTTCGACCAAGGAACCCTGGACGGCCTTATCGGTACCTTGCGCCAGCGCGGCAACAGCAACGCCACCATCAACAGAAAGATGGCGGCCCTCAGCAAACTGCTGCGCAAGGCTCATAAAATGGGGGATATCCACAGCCTGCCCGAGTTCCGCCGCCAGAAGGAGCGGGCGGGACGGATTCGTTTCCTCGAGCGGGACGAAGAAGCACGGTTGTTTGCGTCCATCAGAAGCCGCAGCGAGGATGCGTACAGGCTTTCCATTTTTCTTGTCGACACGGGATGCCGTCTCGGCGAAGCCCTTGGATTGATCTGGAACGACATTCAGGAGCATCGCGTCAGCTTCTGGATTACCAAATCCGGTCGGAGCCGCACCATCCCAATGACCGAGCGGGTCAAGGAAGTGATCAAGCTGGCGCCCACCACCGAAGGACGTCGGCCGAAGGGGCCGTTCACCAAGCTTAGCCAGGCGCAATATCGGGCGATCTGGAACGAGGCCAAGGCGGAGGTCGGCCTCGCCGCCGACGATCAGGTGGTGCCACATATCCTGCGCCACACCTGCGCCTCCCGTCTCGTCCAGGGCGGTATCGACATCAGGCGTGTCCAGATGTGGCTTGGTCACCAGACGCTGTCGATGACCATGCGCTATGCGCATCTTGCCACGAACGACCTCGATGGTTGCGTTGTTGTTCTGGAAGCGCCACGTCACGACGAGGCAGCGAAGACTGGGGAGAGCTCGGTGTTTTCGTCTCCGCTGACGGCTCTATCATCGCCTGCGAAGGCGAAGAAGAGCAAGCCGGCTGCCGTCAAGACGCCCAGCAAGAGTTCGAAGGTTCAGTAG
PROTEIN sequence
Length: 357
MSNEAIQEGEPSGLFAVFSSHASNIKYNYSKIREVKSYRIGELFSAYRDILWDDGRHKYNVSSFIGEIDEILLGERFSAFDQGTLDGLIGTLRQRGNSNATINRKMAALSKLLRKAHKMGDIHSLPEFRRQKERAGRIRFLERDEEARLFASIRSRSEDAYRLSIFLVDTGCRLGEALGLIWNDIQEHRVSFWITKSGRSRTIPMTERVKEVIKLAPTTEGRRPKGPFTKLSQAQYRAIWNEAKAEVGLAADDQVVPHILRHTCASRLVQGGIDIRRVQMWLGHQTLSMTMRYAHLATNDLDGCVVVLEAPRHDEAAKTGESSVFSSPLTALSSPAKAKKSKPAAVKTPSKSSKVQ*