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SCN18_26_2_15_R1_P_scaffold_155_11

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 10648..11046

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 253
  • Evalue 9.00e-65
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 133.0
  • Bit_score: 251
  • Evalue 1.20e-64
DNA-directed RNA polymerase subunit omega n=1 Tax=Rhizobium loti RepID=UPI00037503C8 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 253
  • Evalue 6.40e-65

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGCCCGCGTAACCGTTGAAGACTGCATAGACAAGGTCGACAACCGCTTTGAACTGGTTCTTCTGGCCGGCCACCGCGCCCGTCAGATCAGCCAGGGTGCGATGATCACCGTTCCGCGCGACAACGACAAGAATCCGGTCGTGGCGCTGCGCGAGATCGCCGACGAAACGCTGTCGCCCGATGATCTCAAGGAAGATCTGATCCACTCGCTGCAGAAGCATGTCGAGGTCGACGAGCCGGAAGCCGAGGGCGAGGTCATCGCCGACCAGACCGGCGCGGTGGCCGCCGCCGAGACCGACGATGCCGAGGACAACATCGCATTCGATCGCATGACCGAGGAAGATCTGCTGGCCGGCATCGAAGGCCTGGTCCCGCCGGAAAAAAGCGACGACTATTGA
PROTEIN sequence
Length: 133
MARVTVEDCIDKVDNRFELVLLAGHRARQISQGAMITVPRDNDKNPVVALREIADETLSPDDLKEDLIHSLQKHVEVDEPEAEGEVIADQTGAVAAAETDDAEDNIAFDRMTEEDLLAGIEGLVPPEKSDDY*