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SCN18_26_2_15_R1_P_scaffold_155_24

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 24384..24902

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFC81D related cluster n=1 Tax=unknown RepID=UPI0003CFC81D similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 318
  • Evalue 2.10e-84
RNA polymerase sigma70 {ECO:0000313|EMBL:ESZ24189.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 318
  • Evalue 3.00e-84
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 172.0
  • Bit_score: 317
  • Evalue 1.70e-84

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGACGAGAGGAAGGCAGCCATCCTTGGCGAAATACCGCGCCTGCGCCGCTACGCGCGGTCGCTGTTGCGCGATCGGGATTCCGCCGACGACCTCGTCCAGGACTGCCTGGAGCGGGCGCTGCTGCGGCTCGACAACTGGCAGACGGGAGAAAGCCCCCGGAGGTGGCTGTTTACGATCATGCATCATTTGTTCATCGACCAGATGCGCAGGGTGAATCGTCGCGGCGAAGCCACGATGCTGCCGCTCGAGACTGGGGAGGCGCTTGCCCAACCAGCCCAGCAGATGGACAGCATCGCTTCGCGCGAGATCATCGACGCGTTGCAGGCAATCAGCCCCGATCGCCGCGCGGCTCTCGTCATGGTCGCCATCGAAGGCTTTTCCTACGCGGAAGCAGCCAACATCCTCGGCGTTCCCGCCGGGACCCTGATGTCGCGCATCGCGCGCGGGCGCGAGGAACTGCGCGGCCTGCTCGATGACAACGCGCGGCGCAGATCGATAAGGATCGTGGAAAAATGA
PROTEIN sequence
Length: 173
MDERKAAILGEIPRLRRYARSLLRDRDSADDLVQDCLERALLRLDNWQTGESPRRWLFTIMHHLFIDQMRRVNRRGEATMLPLETGEALAQPAQQMDSIASREIIDALQAISPDRRAALVMVAIEGFSYAEAANILGVPAGTLMSRIARGREELRGLLDDNARRRSIRIVEK*