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SCN18_26_2_15_R1_P_scaffold_157_2

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(353..1852)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T7G9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 479.0
  • Bit_score: 430
  • Evalue 1.50e-117
transcriptional regulator GntR family similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 487.0
  • Bit_score: 459
  • Evalue 1.10e-126
Transcriptional regulator GntR family {ECO:0000313|EMBL:AJK50275.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 487.0
  • Bit_score: 459
  • Evalue 5.30e-126

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
GTGGTGGAAAAGGCATCGCGCCGGCACGAAAGCGCCACGCATCTGGTCGATATCGCCATCGACCGGACGTCGCGGGCCCCGATCGGCCGACAGCTCTATTTCGCCCTGCGCGCCGCCATCGTCGCCGGCAGGATGCCCGCCGGCGCGCGCCTACCTTCGACGCGGGCGGCGGCCCGGCTTTGGGGCGTGTCGCGCGGCGTCGTGGTCGAGGCCTACGATACTTTGCTCAGCGAGAGCTATGTCGTCGGCCATCATGGCTCCGGCACCTTCGTTTCCGCCGACGTGCCAGGGCAGGCGGAGCGCAAACGCCGGACCGTTCCCGCACGCTCAAACGCAAGGAGCGACATCTCCTCCGCCGCACGCTCCGTCATCGGCAACTTGGCGCTGGACCCGCCAGCCCAGGTCCCCTTCGTCACCGGTCGGGCCGAGCCGGACGACAGGACACGCGCCATTCTCAAACGCATAGGCCACCGGCATCTCGACGCGCTGTGTGATCACTATCGGAATCCGCAAGGCGAGGAGAGGCTGCGCCGCGAGGTGGTCAGGTATCTCGCGGCGGCGCGGGGCGTGCGTTGCGAGCCGGGCCGCGTCTTCATCACGTCAGGCTCGCAGCAAGCGATCGATCTTGCCATTCGCACGCTGATCGACCCCGGGGACACCGTTGCGATCGAGGATCCAAGCTATCCGCCGGCGCGTCTGGCGTTCACCGCCGGCGGCGCCAGACTGGTTCCCATCCCGGTTGATCGGCACGGGATCGATATGGGTTTGCTGACCGAATGCGGGGAGAACGTCAGGGCCGTCTATGTGACGCCATCCCATCAATATCCCACGGGAACCGTTCTTTCGATGGCGCGCCGTCTGGCCTTGATCGATTGGGCAGCGGCCAGGGGCGCGTGGATTCTCGAGGACGATTACGACAGCGAATTTCGCTACGATGATCGGCCGCTAGCGGCGCTGCAAGGCATCGACGAGCACGAGCGGGTCATCTATTTCGGCACCTTCAGCAAGGCGCTGCTGCCCGGTTTTCGGCTGGGCTATCTGGTGGTCCCAACGGAGCTGGTGCCGGCCGTCCGGGCGATGCGGGTGCTGCTCGATCGTTTTCCCGCCCCGTTTCACCAGCTCGTGGTCGCCGACTTCCTGAACGAGGGGCATTTCTCCAGCCACCTCAGGCGCCTGCGAGAGGCCTATCGCGCGTCGCGCGACATGCTGGTGGCGCTGTTGCGGGAACAATTCATAGGCGAGCCGGGGATCGGGATCGAGGTGCCGATGCAGGGCGTCCATCTGTTTGCCCGGCTGTCCCCAGGCTTCGACGATGTTGCTATTGCACAAGCAGCGCGCCGGTCAGCGGTAACCGTTCTGCCGATTTCTCCGATGCATCTTGGGGCGGTGACCAGCCACGGCCTGCTGCTTGGCTTCTCCGCCTTGCATCACGAGGATGCGGCGCCTGCCGCCAGGCGACTGGCCCTGGCAGTCCTCCTGACGCGCGCCGGACATGGATAG
PROTEIN sequence
Length: 500
VVEKASRRHESATHLVDIAIDRTSRAPIGRQLYFALRAAIVAGRMPAGARLPSTRAAARLWGVSRGVVVEAYDTLLSESYVVGHHGSGTFVSADVPGQAERKRRTVPARSNARSDISSAARSVIGNLALDPPAQVPFVTGRAEPDDRTRAILKRIGHRHLDALCDHYRNPQGEERLRREVVRYLAAARGVRCEPGRVFITSGSQQAIDLAIRTLIDPGDTVAIEDPSYPPARLAFTAGGARLVPIPVDRHGIDMGLLTECGENVRAVYVTPSHQYPTGTVLSMARRLALIDWAAARGAWILEDDYDSEFRYDDRPLAALQGIDEHERVIYFGTFSKALLPGFRLGYLVVPTELVPAVRAMRVLLDRFPAPFHQLVVADFLNEGHFSSHLRRLREAYRASRDMLVALLREQFIGEPGIGIEVPMQGVHLFARLSPGFDDVAIAQAARRSAVTVLPISPMHLGAVTSHGLLLGFSALHHEDAAPAARRLALAVLLTRAGHG*