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SCN18_26_2_15_R1_P_scaffold_159_15

Organism: SCN18_26_2_15_R1_P_SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39_65_22

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(16270..17493)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L6V1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 404.0
  • Bit_score: 451
  • Evalue 5.00e-124
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJJ29242.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 404.0
  • Bit_score: 451
  • Evalue 7.00e-124
transporter similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 395.0
  • Bit_score: 450
  • Evalue 4.10e-124

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGGCCCTTCCCATCGATCAGCGTCGAGCGGTCATCATCTGGGCGCTCGGCCTGACGCAGATCGTCGGCTACGGAACGCTCTACTACAGCTTCAGCATTCTGGCGCCCGAGATGGCCAGGGATTTCGGCTGGTCACCGGAATGGGTCTTCGGCGTGTTCTCCGCATCACTTCTCTTCAGCGGTCTCGTCGCCCCCGCGGTCGGCCGCCGGATGGACCGACATGGCGCCGCGCGCGTCATGTCGATCGGCTCTCTGGCCGCCGCCCTGGCCCTTTTGCTATGTGCCTTGGCGCCCGAGCGGATCACTTTCGTCGCAGCCGTGGTCGCGATGGAGGTCGCATCCGCCCTGGTGCTCTACAACGCGGCCTTCGCGCTGCTGGTGCAGATAACCCCGCAAGCAGCGCAACGAAGCATCACCCACCTCACCTTGATCGCGGGCTTTTCCTCGACACTGTTCTGGCCCATCACCTCCGAACTCCACAGGCATCTGGCATGGCGGGACGTCTACTTCGTCTTCGCCGCCTGCAATGTGCTGGTCTGCATGCCCATACACTGGTGGCTGGCCACGATCATGAAGGCGAACACGGCGCGGCAGTTGCTCGCCGGAACACGTCCCTCGCTCACCGTCATCGGCAGCATTTCGGGCAATGACCGCCCGAGAGCCTTCATCCTGATGGTCACCGGGTTTGCCTTGCAGGGGTTTGTGCTCTCCGCCCTGCTGATCCATATGGTGCCGCTTCTGACGGCCGTTGGCATGGGCGCGAGCGCCGTGATGGTCGGCACGATATTCGGGCCCTCCCAGGTCTTCAGCCGCCTCATCAACATGCTGTTCGGCAAGAGGCTGTCCAACCTTACGCTCGCCGTGATCTCCGCCGGCTTTCTGGTCGCGGGCGTGGCAACGTTGCTGGCGACAGCGCCCAGGATTTCCGGCGGCATCGCCTTCGCCATATTGTTCGGGCTCGGCTCGGGCATCGCGAGCATCGTACAGGGTTCGCTCCCGCTCGCCCTGTTCGGCTCGGACGGCTATGGGGCGTTGCTCGGACGCGTGTCCGCCATTCGGCTCGTCGTATCGGCGCTGGCGCCGTTCGTACTATCGTTCCTGATGGCGAACATGGGCACGTCATCGGCACTCTGGGTGGTGATCGTGCTGGGTATCGGCGCAGTGGCGGCATTCGCCGGAATCGGACTGGGCCGTCGTTCCCCGGAACTGGTGCCCGAAGCCTGA
PROTEIN sequence
Length: 408
MALPIDQRRAVIIWALGLTQIVGYGTLYYSFSILAPEMARDFGWSPEWVFGVFSASLLFSGLVAPAVGRRMDRHGAARVMSIGSLAAALALLLCALAPERITFVAAVVAMEVASALVLYNAAFALLVQITPQAAQRSITHLTLIAGFSSTLFWPITSELHRHLAWRDVYFVFAACNVLVCMPIHWWLATIMKANTARQLLAGTRPSLTVIGSISGNDRPRAFILMVTGFALQGFVLSALLIHMVPLLTAVGMGASAVMVGTIFGPSQVFSRLINMLFGKRLSNLTLAVISAGFLVAGVATLLATAPRISGGIAFAILFGLGSGIASIVQGSLPLALFGSDGYGALLGRVSAIRLVVSALAPFVLSFLMANMGTSSALWVVIVLGIGAVAAFAGIGLGRRSPELVPEA*