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SCN18_10_11_15_R1_B_scaffold_3121_1

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 3..2069

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003630B48 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 446.0
  • Bit_score: 599
  • Evalue 4.30e-168
Conjugative transfer protein TrbE {ECO:0000313|EMBL:AGC71252.1}; TaxID=1256589 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_75.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 456.0
  • Bit_score: 590
  • Evalue 1.60e-165
conjugal transfer ATPase TrbE similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 379.0
  • Bit_score: 497
  • Evalue 4.90e-138

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2067
ATGATGACGGAGACGCGCGGTGCCACCCCCTTTCGGCTCGATCTGCACAGCGGCGATGTCGGACACGCCTTCGTCGTGGGTCCGACCGGCTCCGGCAAATCCGTGCTTCTTTCTCTCCTGGCGCTCCAGTTCCGCCGCTTCATCGGCTCCCAGGTAGCGATCTTCGATCGTGGTCGCTCGGCTCGCGCGGCATCTCTAGCCATGGGCGGCGAGAGCATCGAGCTTGGCCTCGAGGGCACGCTGTCATTGCAGCCGCTCTCGCGAATCGACGAACCCGGCGAGCTCGCCTTCGCGCTCGAATGGGTCGGCGGCCTCATCAGCAACGAGGGCGTATCGATCACACCCGATATCAAGGACGCGCTCTGGACGGCCCTGAAGAGCCTGGCCTCGGCACCGAAAGGCGAACGCACGCTGACCGGCCTCGCCGTGCTCGTGCAGTCCACTGCGCTGAGCCAGGCGCTGGCACCGTACACGCTCGAAGGCCCCTACGGGCACCTGCTCGATGGCGCAACGGAGAACTTAGCGCTCACGGACGTGCTGCATGTCGAGATGGAGCCGCTCATGCAGCACAAGCGGCTGATCCCGCCCGTGCTCACCTACCTCTTCCACCGCCTCGAAGCCCGTTTCGAAGGCCGGCCGACGCTGCTCGTGCTCGACGAAGCCTGGACTTTCCTCGACGAGCCGATGTTTGCCGCACGCATCCGCGAGTGGCTCAAGACCTTGCGCAAAAAGAACGTCGCCGTGCTGTTCGCCACTCAGTCGCTTGCCGACATCGAGCGATCGGTGATCGCACCTGCCCTCATCGAAAGCTGCCCGACGCGCATCTTCCTGCCCAATGATCGCGCGCTCGAGCCGCAGATGCGCGCGGTCTACGAGCGCTTCGGCCTCAATGGCCGTCAGATCGAGATCCTCGGCCTCGCCACGCCCAAGCGTGACTACTACGTGCAATCGGCTCAAGGCAACCGGCTCTTCGAGCTCGGCCTCGGTCCCGTGGCACTGGCGTTCACTGCGGCCTCGTCGCCCGATGACCAAAAACTCATCGATCGCACGATCGCCGAGGCAACAGACGCCGGCTTCGCCGATGCGTTCCTGCGCGCCAAGGGCCTTGCCTGGGCGGCAGATCTCCTGGCGTCATTTCCCGGCGCCAAACGTCAGCGGACCACGCCGCCACCGCTGCCACGCATCGTTCGGACGGCGCCCCCTCCGACATCCGACACGTCGCAATCCGACTTGCCGGAAGCAGTGCGAGCGCCGGAGCCAGCGGCGGCACCAACAATCCGCGACGATCTGCTTGAGCACCTGGCACAATTCCCCTTAACAGCCAAGCCCAACCGCGCCGCAAGGCGGCGCGCGGCACGCGGGGTTGCCACCGCGCTCGCACTGGCACTCCTAACGAGCACTGCAATCCCGCCGAGGGCGCACGCGCTGACCGTCTTCGATCCCGCGAACTACCAGCAAAACCTGCTGTCGGCCGCCCGTGCCCTCGAACAGATCAACACTCAGCTGCGCGCCTTGCAGAACCATGCGCAGATGATCCTGCGCATGGACCAGAACCTGACGCGACTCGGAGGCACATTGTCTCCCGACCTTCAGCGCACCCTGACCGCAATCCAAACGCAGCTCCGCTCCGGCAACGGTATCGCTCTGAAACTCCAACAGACGCAGGGCACCTACGAACGCTTGTTCCCAGCCCAGGTCTCGGCCGCGCTCTCATCCAATGACGTGTTGCGCAACGCCAAGACCCGATGGGACGAGGAACACGCCGGCCTCAAACGCGCCGCCCTCCTGCAAGGCCAGATCGCCGACGGCATCGAAACCGACACACGCCTCCTCGGCGACGCCATGACCCGATCACGCAACGCCGCCGGCGCGCTCGATGCCACACAAGCCGGCAACGAACTCACCGGCCTCGCCGTCAAGCAGTCCCTCGCATTGCAAGGTCTGCTCGCCGCGCAACATCGCGCCGAGACCGTCAGCCGAGCCCGCAACCTCGCTACCGAGGATGAGGCCCGCCAACGCTTCAAATCCTTCGTCGGCACAGGGTCCGCGTACTCTGCAGGTCGATAA
PROTEIN sequence
Length: 689
MMTETRGATPFRLDLHSGDVGHAFVVGPTGSGKSVLLSLLALQFRRFIGSQVAIFDRGRSARAASLAMGGESIELGLEGTLSLQPLSRIDEPGELAFALEWVGGLISNEGVSITPDIKDALWTALKSLASAPKGERTLTGLAVLVQSTALSQALAPYTLEGPYGHLLDGATENLALTDVLHVEMEPLMQHKRLIPPVLTYLFHRLEARFEGRPTLLVLDEAWTFLDEPMFAARIREWLKTLRKKNVAVLFATQSLADIERSVIAPALIESCPTRIFLPNDRALEPQMRAVYERFGLNGRQIEILGLATPKRDYYVQSAQGNRLFELGLGPVALAFTAASSPDDQKLIDRTIAEATDAGFADAFLRAKGLAWAADLLASFPGAKRQRTTPPPLPRIVRTAPPPTSDTSQSDLPEAVRAPEPAAAPTIRDDLLEHLAQFPLTAKPNRAARRRAARGVATALALALLTSTAIPPRAHALTVFDPANYQQNLLSAARALEQINTQLRALQNHAQMILRMDQNLTRLGGTLSPDLQRTLTAIQTQLRSGNGIALKLQQTQGTYERLFPAQVSAALSSNDVLRNAKTRWDEEHAGLKRAALLQGQIADGIETDTRLLGDAMTRSRNAAGALDATQAGNELTGLAVKQSLALQGLLAAQHRAETVSRARNLATEDEARQRFKSFVGTGSAYSAGR*