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SCN18_10_11_15_R1_P_scaffold_2024_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1311..2939

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037037C1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 536.0
  • Bit_score: 813
  • Evalue 8.70e-233
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EQM83826.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 536.0
  • Bit_score: 812
  • Evalue 2.10e-232
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 535.0
  • Bit_score: 810
  • Evalue 1.60e-232

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
TTGACTGCAGCGAAACACGATCCGGCCACCCCCACGACCGTCGGCGGCATGAGCCGACGCCAGCAGATCCTGCGGCTGCTGCTGCGCTACCGCAACTCGGGCGTTTTCTCCGGCCTGCAGCTGGATGGCGGACTGCCACGCAACACGAAGCTTCCCGACGACGCCGACCCGGCGCAGTTCGTCTCCGACCTGGAAGCGCTGGGCACGACCTTCGTCAAGCTCGGCCAGGTGCTGTCCACGCGCCCGGACATGATCCCGCTGGAGTACGTGGCCGCGCTGGAGCGCATGCAGGAACAGGTCGCGCCCATCCCGGTCGAGCAGATACGCACGGTGATCGAGCAGGAACTCGGCGCGCCGGTCGGCAAGCTGTTCGCCCTGTTCGATCCCGAACCGCTGGGCTGCGCCTCCATCGCCCAGGTGCACCGGGCCGTGCTGCACGACGGCCGCGAAGTCGCTATCAAGGTGCAGAAGCCCGAGGTCGCCGCGCAGCTGCGCTCGGACATCGCCGTGCTGCGCAGCTTCGCCAGCGCCGCCGACCACCTGACCCGCATCGGCCGCCGCGTGCGCTTCGCCGACTGGCTGGACGAGTTCGCCACGACCCTGCGCATGGAGCTGGATTACGAAGCCGAGGCCACCAACCTGTCGCGCTTCGGCCAGCACCTGGCACCCTATCCGGAGCTGTGGGTACCGCAGCCGCTGTGGGACCTGTGCCGGCGACGGGTGCTGACCATGGAACTGGTGCACGGCGTGCGCGTGGACGCGATCCCGCCGGTACGCCGCACCGAGCAGTCGATGCAGCCGCTGGCCGCGGCGCTGGTGCGCGGCTACCTGGACCAGATCTTCGTGCATGGCGAGATCCATGCCGACCCGCATCCGGGCAACCTGCGGGTGACCGACGACCAGCGCCTGGCGGTGTTCGACCTGGGCATGGTCGCGCATGTGCCGCCGCGCCTGCGCGAACGCCTGCTCAAGGTGCTGTTCGCGGCGGTGGACGGGCGTGGCGAGGAAGTGGCCGACGAGATCATCGGCATCAGCACCCGCCTGGAGGACTACGACGAGGAGCGCTACCTGCGCCTGACCGGGCAGATGATCGCCCGCTATGCCGCCAACGACACCCTGTCCGAGGGCCGCGTGGTGCTGGAGATCGTGCGCATCGCCACCGCCTGCGACCTGCGCACGCCGCCGGAACTGAGCCTGCTCGGCAAGGCCCTGCTCAACCTGGAAGGTGCCTGCCGGCTGCTGGCGCCGGAGCTGGATACGCGCGCCGTGGTCGAGCGCCAGCTGCAGCACGTGATGCGCGCGCGCCTGGTCAAGTCGCTGTCGATGGCCAACGTCGCCAGCGAGGCGATGGAGCTGCAGCAACTGCTGCGCACCGGACCGCGGCGGGTGTCCGACATCCTCAGCCTGGTGGCCGAGAACCGGCTGCAGATGAAGGTCACCGGGCTGGAGGAATCGCGGCTGATGGAAAACATCCAGAAGGTCGCCAACCGCATCGCCGCCGGCCTGATCACGGCCGCGCTGCTGCTGTCGTCGGCGCTGCTGATGCGGGTGCCAAGCCACTTCTCGCTGTTCGGCTACCCGGCGCTCGCGATGCTGCTGTTCCTGGTCGGCGTGGTGATCGGCCTGGGC
PROTEIN sequence
Length: 543
LTAAKHDPATPTTVGGMSRRQQILRLLLRYRNSGVFSGLQLDGGLPRNTKLPDDADPAQFVSDLEALGTTFVKLGQVLSTRPDMIPLEYVAALERMQEQVAPIPVEQIRTVIEQELGAPVGKLFALFDPEPLGCASIAQVHRAVLHDGREVAIKVQKPEVAAQLRSDIAVLRSFASAADHLTRIGRRVRFADWLDEFATTLRMELDYEAEATNLSRFGQHLAPYPELWVPQPLWDLCRRRVLTMELVHGVRVDAIPPVRRTEQSMQPLAAALVRGYLDQIFVHGEIHADPHPGNLRVTDDQRLAVFDLGMVAHVPPRLRERLLKVLFAAVDGRGEEVADEIIGISTRLEDYDEERYLRLTGQMIARYAANDTLSEGRVVLEIVRIATACDLRTPPELSLLGKALLNLEGACRLLAPELDTRAVVERQLQHVMRARLVKSLSMANVASEAMELQQLLRTGPRRVSDILSLVAENRLQMKVTGLEESRLMENIQKVANRIAAGLITAALLLSSALLMRVPSHFSLFGYPALAMLLFLVGVVIGLG