ggKbase home page

SCN18_10_11_15_R1_P_scaffold_1775_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3..2261

Top 3 Functional Annotations

Value Algorithm Source
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 644.0
  • Bit_score: 609
  • Evalue 1.30e-171
NAD-dependent DNA ligase LigA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DB79C0 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 382.0
  • Bit_score: 631
  • Evalue 6.50e-178
Tax=BJP_08E140C01_Xanthomonadales_64_42 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 805.0
  • Bit_score: 642
  • Evalue 5.10e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2259
GCGCCCTCGCCCAGCCACAGCCCCAGCGGGATCAACACCACCGCCAGCATCGCCGAGCTCCGCCAGCAGCTGGCCATGGCCGCACAGGCCTACCACGAGCATGACGAGCAGCTGATTCCCGACGCCGAGTACGATGCGCTGATGCGCGAGCTGGAGGCGCTGGAAGCGGCGCATCCGCAGCTGGACAACGCCGATTCGCCCAGCCACCAGGTCGGCGGCAGGCCGTCCTCGCGCTTCGCCGAAGTGGTGCACGCCCTGCCGATGCTGTCGCTGGGCAATGCCTTCAGTGACGAGGAAGTGCGCGACTTCGTGCGCCGCATCGATGAGCGCCTGCACCGCAGCCAGCTGCTGTTCTCGGCCGAGCCCAAGCTCGACGGCCTGGCGATCAGCCTGCGCTATGAGGATGGCGCGTTCGTGCAGGGCGCGACCCGCGGCGATGGCACCACCGGCGAGGATGTCACCGCCAACCTGCGCCAGATCCGGGTGATTCCCGCCCGGCTCGACGGCGAAGGCTGGCCGGCGGTGCTGGAGGTGCGCGGCGAGGTCTACATGCCGCGCGCCGATTTCGAGAAATACAACGAGCAGGCGCGCCTGCATGGCGGCAAGGTGCTGGCCAATCCGCGCAACGGCGCGGCCGGCTCGCTGCGCCAGCTCGACCCGAAGGTCAGCGCGCAGCGGCCGTTGAGCTTCTATGCCTACGGCACCGGCGAGGTCGACGGCGGCGAGCTGCCGGCCACGCATTCGGCGACGCTGGCGCGGCTGGCGCAGTGGGGCTTCCCGGTCAGCGACCTGTGCCGCGTGGTCGAGGGCGCCGACGGCCTGCTCGATTACTACCGCGAGATCGGCGCTCGCCGCGACGGGCTGGCGTTCGATATCGACGGGGTGGTCTACAAGCTCGACGACCGCGATGGCCAGCGCGAGATGGGCTTCGTCGCCCGCGCGCCGCGCTGGGCCATCGCCCACAAGTTCCCGGCGCAGGAGCAGACCACCACGGTGGAGGCGATCGAGATCCAGATCGGCCGCACCGGCGCGGCCACGCCGGTGGCGCGCCTGCAGCCGGTGCAGGTGGCCGGGGTGACCGTCACCAACGCCACCCTGCACAACGCCGACCAGATCGCCCGGCTGGACGTGCGCGTGGGCGATACGGTGATCGTGCGCCGCGCCGGCGACGTGATCCCCGAAGTGGTCAGCGTCATCGCCGACCTGTACCGGCTGACCCGCGACCAGCTGTTGCACCTGAAACTGGTGCTCGACGCCGACGATTCCTCCGCGCTGGCCACCAGTCTCAAACCGCACCTGCCGGCCGAGGGCAGTGGTGCGGTGCTCAATGCCGTGCTCAGGCTCGATGGCGAAGGCGACACCTGGCGCGCGCAGGCGCTGGCATTGCCGGTGGCCTTCGAATGGAACACGAAGAAGATCGCCACCCGCTGGGCCGACAACCTGATCGCCGCCATCGACGCCAGCCGCGATGCCACGCTGGAGCGGCTGCTGTTCGCGCTGGGCATCGAGCATGTCGGCGAGAGCACCGCCAAGGCGCTGGCGCAGTGGTTCGGCGACCTGGAGCTGATCCGCCAGCTGCCGTGGCCGCTGTTCAAGCGCGTGCCCGACATCGGCGGCGAGGTGGCGCGCTCGCTGGGTCACTTCTTCGAGCAGGAAGGCAACCAGCAGGCCATCGATGCGCTGCTGCAGGTCGGGCAGGTGCGCATCCGCGACACCCGCCTGCCATCGGCGCGGCTGCGCGAAGGACTGGACCTGGCGCAGTTGCTGGTCGAGGCCGAGATTCCCGGCATCACCCGGCTGCGCGCGGAGAAACTGGTGGCCGCGCTGCCGTCCGCGCAGCAGATCCTCGATGCCGAGCCGGGGCACTTCATCGCCGCCGGTCTGCCGGAGGACACCGCGCGCGGACTGGTGCAGTGGCTGGAAGGCGAGAATCACGGCCAGTTGCTGCTCAAGGGCGAAGCGCAGATGCAGCGCCTGCTGGAACTGGCGCCGGAAGCCAGCGCGCAGCCGGCCGGGCCGCTGGATGGCCAGACCGTGGTGCTGACCGGCACGCTTTCGCTGCTGACCCGCGACGCCGCAAAGGCGCGGCTGGAAGCGCTGGGCGCCAAGGTCGCCGGCAGCGTGTCGAAGAAGACCGCCTTCGTGGTCGCCGGCAGCGAAGCCGGCTCCAAGCTGGACAAGGCCAACGAACTGGGCGTGGAGGTGTGGGACGAACCGCGCCTGCTCGCCTTCCTCACCGAACACGGACACCACCCATGA
PROTEIN sequence
Length: 753
APSPSHSPSGINTTASIAELRQQLAMAAQAYHEHDEQLIPDAEYDALMRELEALEAAHPQLDNADSPSHQVGGRPSSRFAEVVHALPMLSLGNAFSDEEVRDFVRRIDERLHRSQLLFSAEPKLDGLAISLRYEDGAFVQGATRGDGTTGEDVTANLRQIRVIPARLDGEGWPAVLEVRGEVYMPRADFEKYNEQARLHGGKVLANPRNGAAGSLRQLDPKVSAQRPLSFYAYGTGEVDGGELPATHSATLARLAQWGFPVSDLCRVVEGADGLLDYYREIGARRDGLAFDIDGVVYKLDDRDGQREMGFVARAPRWAIAHKFPAQEQTTTVEAIEIQIGRTGAATPVARLQPVQVAGVTVTNATLHNADQIARLDVRVGDTVIVRRAGDVIPEVVSVIADLYRLTRDQLLHLKLVLDADDSSALATSLKPHLPAEGSGAVLNAVLRLDGEGDTWRAQALALPVAFEWNTKKIATRWADNLIAAIDASRDATLERLLFALGIEHVGESTAKALAQWFGDLELIRQLPWPLFKRVPDIGGEVARSLGHFFEQEGNQQAIDALLQVGQVRIRDTRLPSARLREGLDLAQLLVEAEIPGITRLRAEKLVAALPSAQQILDAEPGHFIAAGLPEDTARGLVQWLEGENHGQLLLKGEAQMQRLLELAPEASAQPAGPLDGQTVVLTGTLSLLTRDAAKARLEALGAKVAGSVSKKTAFVVAGSEAGSKLDKANELGVEVWDEPRLLAFLTEHGHHP*