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SCN18_10_11_15_R1_P_scaffold_4956_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 377..1189

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 270.0
  • Bit_score: 483
  • Evalue 1.10e-133
Formamidopyrimidine-DNA glycosylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YXV3_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 270.0
  • Bit_score: 483
  • Evalue 7.80e-134
5-hydroxymethyluracil DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 270.0
  • Bit_score: 481
  • Evalue 8.40e-134

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCAGAACTCCCCGAAGTCGAAACCACCCGCCGCGGCCTGGAACCCCACCTGCAGGGGCGGCGCATCCATGGCGTGATCCTGCGCCGGCCGGACCTGCGCTGGCCGATTCCGGCGGAGATCGAGCGCGAGCTGCCCGGCCAGCGCATCGCCGCGATCCGCCGCCGCGCCAAGTACCTGCTGCTGGATACCGATGCCGGCAGCGCGCTGCTGCACCTGGGCATGTCCGGCAGCCTGCGCGTGCTGCCCGGCGACACGCCGGTGCGCGCGCACGACCACGTGGACATCAGCCTGGAGGATGGGCGCCTGCTGCGCTTCAACGACCCGCGCCGGTTCGGCTGCCTGCTGTGGCAGCCGGCGGGCGAAACCCACGAACTGTTGCGCGCGCTCGGCCCGGAACCGCTGGACGACGCGTTTGACGGCGACTACCTGTTCGCGCGCAGCCGCGGCCGCAGCGCGCCGGTCAAGACCTTCCTGATGGACCAGCGCATCGTCGTCGGCGTCGGCAACATCTATGCCGCCGAAAGCCTGTTCATGGCCGGCATCAATCCGCTGCGCGAGGCCGGCAAGGTCTCGCGCGAACGCTACCGGCGCCTCGCCACGGCGGCAAAGGAGATCCTCGGCCACGCCATCACCCGCGGCGGTACCACCCTGCGCGATTTCATCAGCCCCGATGGTGCGCCCGGCTATTTCGAGCAGGAGCTGTCGGTGTATGGCCGCGAAGGCGAGGCCTGCGTGCGCTGTGGGCGCGCACTGCGCCATGCCAGCATCGGCCAGCGCGCCAGCGTCTGGTGTGCTCACTGCCAGCGGTGA
PROTEIN sequence
Length: 271
MPELPEVETTRRGLEPHLQGRRIHGVILRRPDLRWPIPAEIERELPGQRIAAIRRRAKYLLLDTDAGSALLHLGMSGSLRVLPGDTPVRAHDHVDISLEDGRLLRFNDPRRFGCLLWQPAGETHELLRALGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQRIVVGVGNIYAAESLFMAGINPLREAGKVSRERYRRLATAAKEILGHAITRGGTTLRDFISPDGAPGYFEQELSVYGREGEACVRCGRALRHASIGQRASVWCAHCQR*