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SCN18_10_11_15_R1_P_scaffold_5198_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(122..430)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000367E5F8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 93.0
  • Bit_score: 153
  • Evalue 7.00e-35
Membrane protein {ECO:0000313|EMBL:AKC86292.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 101.0
  • Bit_score: 153
  • Evalue 1.30e-34
Interferon-induced transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 93.0
  • Bit_score: 144
  • Evalue 1.20e-32

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGAATACCGTCAATCCCGCCAGCAGCATCCCCAACCACCTGGCCTGGTCGATCATCGCCACGGTCCTGGCCACCTGCCTGTGCTGCCCGCTGGGCCTGGTGGGCATCGTCGCCATCGTGTTCTCCAGCAAGGTGAACAACCTGCTGAGCCAGGGCGACATCGACGGCGCCCGCCGCGCCTCCAACAACGCCAAGACCTGGTGCTGGGTGGCCACCGCGCTGGCCATCGTCGGCCTGCTGTTCAACGTCATCTACTTCGCCATGGGCGGCAGTGCGGCCTACCTGCAAATGCTGCAGCAATACCAGTAA
PROTEIN sequence
Length: 103
MNTVNPASSIPNHLAWSIIATVLATCLCCPLGLVGIVAIVFSSKVNNLLSQGDIDGARRASNNAKTWCWVATALAIVGLLFNVIYFAMGGSAAYLQMLQQYQ*