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SCN18_10_11_15_R1_P_scaffold_3827_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(211..2082)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSL7_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 545.0
  • Bit_score: 1026
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 545.0
  • Bit_score: 1034
  • Evalue 0.0
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 545.0
  • Bit_score: 1026
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATCGGCTTCGGCCTGATCGGCGGCTCGATCGCGCGCGATATCGCGGCGCTCGGGCTGGCGAGGCAGGTCGTCGTCTCCAGCCGCAGCCCCGAGACGCTGAAACGCGCCGAGGAACTGGGGCTCGGCACCGAATACGTCGCTTGCGCCGCGGAAGCGGTGAAGGATGCCGATCTGGTGATCGTCTCGGTGCCGGTCGGCGCTTCCGGGGCGGTCGCCGAGCAGATCGCCGGCACCCTGAAGCCGGGCGCCATCGTCGTCGGCACCGTCGTCGACGTCCGCGGCGACGTGGTGGTGATCAACGCCGGTCTGAAGTCCGAAGGCATCGTGCCGATCGAACAGTTCCGTAACGACGCTGGCGAAATCGACGTGGGCGTGGGCGACCAGGTGAAGGTTGCTCTGGACTCCATCGAGAACGGCTTCGGCGAAACCGTCCTGTCGCGCGAGAAGGCCAAGCGCGCGATGGTGTGGGACGAGCTGGAAGAAGCGTTGGAGAAGAACGAGACCATCACCGGCCGCATCAGCGGCAAGGTCAAGGGTGGTTTCACCGTCGACATCAAGGATGTCCGCGCGTTCCTGCCGGGTTCGCTGGTCGATGTGCGCCCGGTGCGCGACCCGGCCTACCTGGAAGGCAAGGAGCTGGAGTTCAAGCTCATCAAGCTCGACCGCAAGCGCAACAACGTGGTCGTTTCCCGCCGTGCGGTCGTCGAGAGCGAGCACTCGGAAGAGCGCGAGCAGCTGATGGACAAGCTGCAGGAAGGCGCGATCCTGAAGGGTGTCGTCAAGAACCTGACCGACTACGGCGCGTTCGTGGACCTGGGCGGCATCGACGGCCTGCTGCACATCACCGACATGGCGTGGAAGCGCGTGCGCCATCCGTCCGAAGTCGTGAACGTCGGCGACGAGCTGGACGTGCGCGTGCTGAAGTTCGACCGCGAGCGCAACCGCGTTTCGCTGGGCCTGAAGCAGCTGGGCGAGGATCCGTGGGACAACATCTCGCGTCGTTACCCGGCCAACAGCCGCGTGTTCGGCAAGGTCTCCAACGTCACCGATTACGGCGCGTTCGTCGAGATCGAGCCGGGCGTGGAAGGCCTGGTGCACGTCTCCGAGATGGACTGGACCAACAAGAACGTCAACCCGTCCAAGGTCGTGCAGGTTGGTGACGAAGTCGAAGTGATGGTGCTGGACGTCGACGAAGAGCGTCGCCGCATCTCGCTGGGCATGAAGCAGGTCGCCGCCAATCCGTGGGAAACCTTCGCCGCCACCCACAAGAAGGGCGACAAGGTGTCCGGCCAGATCAAGTCGATCACCGACTTCGGCATCTTCATCGGCCTGGACGGCGGCATCGACGGCCTGGTCCACCTGTCCGACATCAGCTGGAACACCACCGGCGAAGACGTGGTCCGCAACTTCAAGAAGGGCGATACCCTGGACGCCGTCGTCCTGGCCGTCGATCCGGAGCGCGAGCGCATCTCGCTCGGCGTGAAGCAGCTGGAGCAGGATCCGTTCGGCCAGTACATGGCGGCCAATCCGAAGGGCTCCAAGGTCGAAGGCGTGGTGAAGGAAGTCGACGCCAAGGGCGCCGTGATCGAACTGGCCGACGGCATCGAAGGCTACGTTTCGGCCCGCGACATCAGCCACGACCGCGTGGACGATGCTTCGCAGCACCTGAAGGTCGGCGACAAGGTCGAAGCCAAGTTCGTGGGCATGGACCGCAAGGGCCGTACCATGCAGCTGTCGATCAAGGCCAAGGACGAAGCCGAGACCGCCGAAGCGCTGGCCGAGTACAACAAGTCCTCGACCGAAGCCGCTGCCGGCACCACCAGCCTGGGCGCGCTGCTGCGCGCGCAGCTGGGTGGCAACAAGTCCGAGTAA
PROTEIN sequence
Length: 624
IGFGLIGGSIARDIAALGLARQVVVSSRSPETLKRAEELGLGTEYVACAAEAVKDADLVIVSVPVGASGAVAEQIAGTLKPGAIVVGTVVDVRGDVVVINAGLKSEGIVPIEQFRNDAGEIDVGVGDQVKVALDSIENGFGETVLSREKAKRAMVWDELEEALEKNETITGRISGKVKGGFTVDIKDVRAFLPGSLVDVRPVRDPAYLEGKELEFKLIKLDRKRNNVVVSRRAVVESEHSEEREQLMDKLQEGAILKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVNVGDELDVRVLKFDRERNRVSLGLKQLGEDPWDNISRRYPANSRVFGKVSNVTDYGAFVEIEPGVEGLVHVSEMDWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRISLGMKQVAANPWETFAATHKKGDKVSGQIKSITDFGIFIGLDGGIDGLVHLSDISWNTTGEDVVRNFKKGDTLDAVVLAVDPERERISLGVKQLEQDPFGQYMAANPKGSKVEGVVKEVDAKGAVIELADGIEGYVSARDISHDRVDDASQHLKVGDKVEAKFVGMDRKGRTMQLSIKAKDEAETAEALAEYNKSSTEAAAGTTSLGALLRAQLGGNKSE*