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SCN18_10_11_15_R1_P_scaffold_3943_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(312..1289)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FA0B3C similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 320.0
  • Bit_score: 381
  • Evalue 5.00e-103
Stenotrophomonas maltophilia strain ZBG7B contig_120, whole genome shotgun sequence {ECO:0000313|EMBL:KIP80028.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 314.0
  • Bit_score: 371
  • Evalue 9.60e-100
glycosyl transferase family protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 320.0
  • Bit_score: 326
  • Evalue 5.40e-87

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGCAGTTGGCATGGACGGTTCCGGGACTGCTGGCGGTCGTTCTGGTCGCAGCCTTGTTGACGGCCATGGCGCGTGGCTATGCGCTGCGCCGGCAACTGCTTGACCAGCCCGGGGAGCGCAGGAGCCATGCGGTCGCGACGCCGCGCGGGGGGGGCATCGCCATCGTCGCTTCGCAGCTGCTCGCCTGCGCGTGCATCGGCCTCCTGTTCCCCGCGGCAGCGGCGACGCTTGCGGTATTTTCCGCCGGCCTGCTGCTGGTTGCGGGAATCGGCTGGTGGGACGATCACAGGCCCTTGCCGGCACTTCCGCGGTTGGCCGTGCATGTCCTGGCCGGCCTGCTGCTGGCGGGCCTGGTGTGGCATTGGACCGGCGATGCGTTCCGCGCCGTTTCCAGCGCAGTACTGGCCATCGGTCTGATCAACGTCTGGAACTTCATGGACGGGGTCGATGGCCTGGCCGCCACGCAGGCGCTGCTGGCAGCGCTGGCCTACGCCCTGCTGCTGCCCACCCCGGTTGCCGGGCTGGCGCTGGTCCTGGCGGCGGGCGTAGCGGGGTTCCTCCCATTCAACTTCCCCAGGGCGCGGATCTTCATGGGCGACGTCGGCAGCGGCGCCCTCGGCTATCTGCTGGCCGGGCTGGTCGCATTGGGGCTGGCGACGGACAGCGCGCCCCTGGCCGTGCTGCTGATCCCGCTGTCCGCGTTCCTCATCGATGCCGGGCTGACGCTGGCAGGGCGCATTCTCGCGGGGGAGCGCTGGATGCAGCCGCACACCCGGCATCTCTACCAGCGCTTGGTGAAATCCGGCCACAGTCACGTCACAGTCACGTTGTGCTACGCATTGTTCGGCGTTGCCGGAATCGGACTGACACTGGTGTCCCTCCGGCTTCCTTCGCCGTGGAACCAGCTGGCGGCCATCGCGTGGGGGGCGGCGGCAGCGGGTCTCTGGTTCGTTCTACGGAAAAAAGCTCATCAATAG
PROTEIN sequence
Length: 326
MQLAWTVPGLLAVVLVAALLTAMARGYALRRQLLDQPGERRSHAVATPRGGGIAIVASQLLACACIGLLFPAAAATLAVFSAGLLLVAGIGWWDDHRPLPALPRLAVHVLAGLLLAGLVWHWTGDAFRAVSSAVLAIGLINVWNFMDGVDGLAATQALLAALAYALLLPTPVAGLALVLAAGVAGFLPFNFPRARIFMGDVGSGALGYLLAGLVALGLATDSAPLAVLLIPLSAFLIDAGLTLAGRILAGERWMQPHTRHLYQRLVKSGHSHVTVTLCYALFGVAGIGLTLVSLRLPSPWNQLAAIAWGAAAAGLWFVLRKKAHQ*