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SCN18_10_11_15_R1_P_scaffold_1116_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 979..2532

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 517.0
  • Bit_score: 861
  • Evalue 4.80e-247
leuA; 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 515.0
  • Bit_score: 846
  • Evalue 3.30e-243
2-isopropylmalate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DCE22 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 517.0
  • Bit_score: 858
  • Evalue 2.20e-246

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
GTGACTACTCCAACCATCAATACCCCCCGAATTACCATCTTCGACACGACCCTGCGCGATGGCGAACAGTCACCGGGCTGCAGCATGACCCCACCGCAGAAGCTGGTGATGGCGCGCGCCCTGGCCGAGCTGGGCATGGACGTGATCGAAACCGGCTTCCCGGCAAGTTCCCAATCCGACCGCGAGGCCATGGCCCTGATCGGCCGCGAGGTACGCGAGCCGGTGCTGGCGGTGCTGTCGCGCTGCCTGCCCGGCGACATCGAGACCTCGGCCAAGGCGCTGGAGGCCGCCGCCAAGCCGCGCCTGCACGTGTTCCTGTCCACCAGCCCGCTGCACCGCGAGCACAAGCTGCGCATGAGCAAGGAGCAGGTACTGGAATCGGTGCACAAGCACGTGACGATGGCGCGCGGCTACATCGACGACGTCGAGTTCTCGGCCGAGGACGCCACCCGCACCGAGCTGGACTTCCTGACCGAGGTGGCGCAGGTCGCCATCGCCGCCGGCGCGCGCACCATCAACCTGCCCGATACCGTCGGCTTCACCACGCCGGATGAGATCCGCGCGATGTTCCAGCACGTCATCGGCAACGCCGCCGGCGCCGACAAGGTGATCTTCAGCGCCCACTGCCACAACGACCTGGGCCTGGCCGTGGCCAATTCGCTGGCCGCCATCGAAGGCGGCGCGCGCCAGGTGGAAGGCTCGATCAATGGCATCGGCGAGCGCGCCGGCAACTGCGCGCTGGAAGAAATCGCCATGGTGCTGAAGGTGCGCAACGCCTTCTACAACTTCGACACCGGCTTCGACACCCGCCGCATCGTGCCGACCTCGCAGCTGCTGCAGCGGCTGGTGGGCATGCCGGTCCAGCGCAACAAGGCCATCGTCGGCGCCAACGCGTTCGCGCACGAGTCGGGCATCCACCAGCACGGCATGCTGCGCAACCGCAACACCTACGAAATCATGCATCCGGAAGACGTGGGCTGGGAGTCCTCGCAGATGGTGCTGGGCCGCCACAGCGGCCGCGCCGCGGTCGAAGCGCGCCTGCGCGCGCTGGGCTATTGGCTGGAAGAGGAGGAGCTGAAGCTGGTGTTCGACCAGTTCAAGGCCCTGTGCGAGCAGCAGCGCGTGGTTACCGACGCCGACCTGCAGACCCTGATGCAGGGCAATTCCGGTGGCGACGGCTACCGCCTGGCGTCGATGACCATCAGCGACGTCGGCAGCCGCGCCAACGCACTGGTCGAACTGTCCGACCCGGAAGGCAACCGCGTGGCCGAGACCGCGCAGGGCGACGGCCCGGTGGATGCGCTGTTCTCGGCGCTGTCGGCCGCCACCGGCGTGCAGCTGACGTTGGACAGCTACCACGTGCACAGCGTCGGCATCGGCGCCGACGCACGCGGCGAGGCCAACCTGGGCGTGCGCCACGAAGGCAACATCTACGAGGGCACCGGCACCAGCCGTGACATCATCGAGGCCAGTGCACTGGCCTGGCTGGACGTCACCAACCGCCTGCTGCGCCAGCGCGAAAGCAGCAAGACCCAGGAAGCCGTCAGCGCCTGA
PROTEIN sequence
Length: 518
VTTPTINTPRITIFDTTLRDGEQSPGCSMTPPQKLVMARALAELGMDVIETGFPASSQSDREAMALIGREVREPVLAVLSRCLPGDIETSAKALEAAAKPRLHVFLSTSPLHREHKLRMSKEQVLESVHKHVTMARGYIDDVEFSAEDATRTELDFLTEVAQVAIAAGARTINLPDTVGFTTPDEIRAMFQHVIGNAAGADKVIFSAHCHNDLGLAVANSLAAIEGGARQVEGSINGIGERAGNCALEEIAMVLKVRNAFYNFDTGFDTRRIVPTSQLLQRLVGMPVQRNKAIVGANAFAHESGIHQHGMLRNRNTYEIMHPEDVGWESSQMVLGRHSGRAAVEARLRALGYWLEEEELKLVFDQFKALCEQQRVVTDADLQTLMQGNSGGDGYRLASMTISDVGSRANALVELSDPEGNRVAETAQGDGPVDALFSALSAATGVQLTLDSYHVHSVGIGADARGEANLGVRHEGNIYEGTGTSRDIIEASALAWLDVTNRLLRQRESSKTQEAVSA*