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SCN18_10_11_15_R1_P_scaffold_6463_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2..1519

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Pseudomonas geniculata RepID=UPI000299D314 similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 508.0
  • Bit_score: 812
  • Evalue 1.40e-232
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 507.0
  • Bit_score: 801
  • Evalue 1.20e-229
TonB-dependent receptor {ECO:0000313|EMBL:CCH14022.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 507.0
  • Bit_score: 801
  • Evalue 5.80e-229

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
TTCTTTGAATTCGCCGGCAAGAGCTTCGACTGGAACGTCGGCGCGCTGTGGAACCGCAACGAAGTCACCAAGAGCAACCGCGGTGACATGAGCCTGATCGCCTCCGAGCAGGCGCTGGGCCAGTCGTTCATCGATGCCAACGGCGTCGCCCGCTGCGGCACCGCGGCCAAGCCGGTCGACGGCTGCTACGCCTGGAACCCGCTGCTGCCCTACGGCGTGAGCGGCCCCGGCTCGCTCGCCAACAAGGATCTGCAGGACTTCCTGTTCCCGATCTACACCACCACCGGCACCACCAAGACCACCAGCTTCACGGCCGACCTCAGCGGTTCGATCGTGACCCTGCCGGCGGGCGACCTGGGCTTCGCCGTGGGCGTGGAACACCGCAAGGAAGAAGGTCGTTACGTTCCGGACGCGTTCGCGCAGTCGGGCATGTCCACCGGTCTGGCCTCGACCACCACTTCCGGTGCCTATGACCTGGACGAGGTGTACCTGGAGCTGAACATCCCGGTGCTGGCCGACATGGCCTTCGCCAAGGAACTGACCGTCAACGTCGCCAGCCGCTACTCCGATTACAGCAACTTCGGCGGCACCACCAACAGCAAGTTCGGCCTGACCTGGCGTCCGACCGACGACCTGCTGGTCCGTGGTACCTATGCCGAGGGCTTCCGTGCCCCGTCGATCGACAACCTGTACGGCGGCATCGGCTCCTCGTTCGAGAAGTACACCGATCCGTGCTCGGTCGGTGTTGGCGGAAGCGTCGCCGGCAATGCCGCATGTACCGCTGCCGGCGTGCCGGGCGACTACGTGCAGCTGGGCCAGGGCCTGGCGCCGTGCACCACCTGGCCGTGCGCCACGCCGGACCAGTTCATCAGCGGCTCCAACGAAAACCTGCTGCCGGAAACCTCGACCAGCAAGACCGTTGGCATCGTGTGGAGCCCGCGTTGGGTGCAGGGGCTGGACGTTTCGCTGGACTGGTTCCGTTACGAGATCAAGAACATGATCATCGAAGACGACGTGGACCGCATCCTGCGTGACTGCTACGTGCTCGGCGATTCGAGCCGTTGCGCCGGCATCGTCCGTGCGCCCGATGGCCACATCACCCAGCTGTTCTATGGCCTGACCAACCTCGGCCAGATGAAGACCGAAGGCTACGATGTGGGCGTCAAGTACCGCCTGCCGGAGCTGGCGATCGGCCAGTTCAGCATCGATTGGCAGACCACCTACACCTCCAAGTATGACGAAGCCGGCCAGAACAAGGACGGTGATGACATCACCATCGGCAACGTCGGCGCCCCGGGCATCTTCCGCGTGCGTTCCAACCTGGGCGTGAACTGGGCGCTGGGCGATTTCGGTGTCAACTACACCGCGCGCTACTACTCGGGCATGAAGGAAGGCTGCGGCCTGACCAGCTACGCCTGGTGCAACAAGCCGGATCACATCTCCAATGGCGAGAGCGATCCGCTGCACGTTGCCGGTTCGAACACCTTCCACGACCTGCAGGTCAACTGGAAGGCGCCG
PROTEIN sequence
Length: 506
FFEFAGKSFDWNVGALWNRNEVTKSNRGDMSLIASEQALGQSFIDANGVARCGTAAKPVDGCYAWNPLLPYGVSGPGSLANKDLQDFLFPIYTTTGTTKTTSFTADLSGSIVTLPAGDLGFAVGVEHRKEEGRYVPDAFAQSGMSTGLASTTTSGAYDLDEVYLELNIPVLADMAFAKELTVNVASRYSDYSNFGGTTNSKFGLTWRPTDDLLVRGTYAEGFRAPSIDNLYGGIGSSFEKYTDPCSVGVGGSVAGNAACTAAGVPGDYVQLGQGLAPCTTWPCATPDQFISGSNENLLPETSTSKTVGIVWSPRWVQGLDVSLDWFRYEIKNMIIEDDVDRILRDCYVLGDSSRCAGIVRAPDGHITQLFYGLTNLGQMKTEGYDVGVKYRLPELAIGQFSIDWQTTYTSKYDEAGQNKDGDDITIGNVGAPGIFRVRSNLGVNWALGDFGVNYTARYYSGMKEGCGLTSYAWCNKPDHISNGESDPLHVAGSNTFHDLQVNWKAP