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SCN18_10_11_15_R1_P_scaffold_1306_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 449..1312

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F228 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 282.0
  • Bit_score: 395
  • Evalue 3.00e-107
LysR-family transcriptional regulator {ECO:0000313|EMBL:KFL45388.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 286.0
  • Bit_score: 391
  • Evalue 7.90e-106
Transcriptional regulator, LysR family protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 282.0
  • Bit_score: 389
  • Evalue 4.60e-106

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
GTGGTGGACTGCGCCGGCTTCACCCGCGCCGCCGACCAGCTGAACCTGCCGCGCTCCACTGTTTCCGAGGCGGTCCGCACGCTGGAGCAGCGGCTGGGCACGCGCCTGCTCCATCGCACCACCCGCCAGGTCACCCCGACCCAGGACGGGCTGCTGTTCCACGCCCGCTGCCAGCAGCTGATCGCCGACATGGACGAGGCCGAGCAGCTGTTCCGGCAGGCGCCGCATGCGCTGAGCGGCCGCCTGCGGGTGGACGTGCCCGGCCGCATCGGCCGCCTGATCCTGGCGCCGGCGCTGCCGCGCTTCCTCGACGCGCACCCGGGGATCGACGTCGAGCTGGGCATGACCGACCGCACCGTCGATCTGGTCGAGGATGGCGTGGACTGCGCACTGCGGGTCGGCCCGCTGCAGGATTCGCGGCTGGTGGCGCGCGGCCTCGGCCAGCTGCCGCTGGTCAACGTGGCCAGCGCCGGATACCTCGCCGCGCACGGCATCCCCGCCCATCCCCGACAACTGCCCGACCATTGGGGCGTGCGCTACGCCTCGCCCGGCAACGGCCGGGTCGAACCCTGGGAGTGGCGCGAGGAAGGCGTGCTGCACGAACAGCCGCTGCGCGGGCGCGTCACCGTCAACAGCGCCGAGGCCTACATCGCCTGCTGCATCGCAGGGATGGGCCTGATCCAGATTCCGGCATACGACGTACGCCGCGAACTGGCCGACGGCACCCTGGTCGAAGTGATGCCCGGCCATCGCGCCGACCCGCTGCCGATGCACCTGCTGTATCCGCACCGGCGGCACCCGTCGCAGCGGCTGCAGGTGTTCGTGGCCTGGTTGCAGGAGGTGCTGGGCGAAGCCGTCCGGTAG
PROTEIN sequence
Length: 288
VVDCAGFTRAADQLNLPRSTVSEAVRTLEQRLGTRLLHRTTRQVTPTQDGLLFHARCQQLIADMDEAEQLFRQAPHALSGRLRVDVPGRIGRLILAPALPRFLDAHPGIDVELGMTDRTVDLVEDGVDCALRVGPLQDSRLVARGLGQLPLVNVASAGYLAAHGIPAHPRQLPDHWGVRYASPGNGRVEPWEWREEGVLHEQPLRGRVTVNSAEAYIACCIAGMGLIQIPAYDVRRELADGTLVEVMPGHRADPLPMHLLYPHRRHPSQRLQVFVAWLQEVLGEAVR*