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SCN18_10_11_15_R1_P_scaffold_1401_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 313..942

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 209.0
  • Bit_score: 396
  • Evalue 1.80e-107
23S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003726B36 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 208.0
  • Bit_score: 395
  • Evalue 2.20e-107
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 384
  • Evalue 1.80e-104

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCCCGCAGCAAGAGCAGTCAACGCTGGTTGAAGGAGCATTTCTCCGACCCCTTCGTGAAGAAGGCGCAGTCCGAGGGCATGCGTTCGCGCGCCGCCTACAAGCTGGAGGAACTGCTCCAGCGCGACCGCCTGCTGAAGCCGAACATGGTGGTGGTCGACCTCGGCGCCGCGCCGGGCGGCTGGTCGCAGCAGGTGCGGAGACAACTGGGCGACAGCGGCCGAGTGCTGGCGCTGGACATCCTGGAGATGCCGCCGCTGGCCGGCGTGGAGTTCCTTCATGGTGACTTCAGGGAAGAAACGGTCCTATCCCAGTTCGAGGCCATGCTCGGCGGCCAGCCGGTGGACCTTGTCCTGTCGGATATGGCCCCCAATAAGAGTGGTATGGATGCGGTGGACCAGCCGCGGATGATGCACCTGGCGGAGCTGGCGATGGATTTCGCCGACAACCATCTCAAGCCGGGCGGGGCGTTCCTGATCAAGCTGTTCCAGGGCGTCGGCTTTGACGACTACGTGCGGGAAATGCGCCGCCGTTACGACAAGGTCGTGATCCGCAAGCCGGAAGCCTCGCGCAAGCGCTCGCCCGAGGTCTACGCCCTGGGCCAGGGCAAGCGTCCGCAGATCAAGTAA
PROTEIN sequence
Length: 210
MSRSKSSQRWLKEHFSDPFVKKAQSEGMRSRAAYKLEELLQRDRLLKPNMVVVDLGAAPGGWSQQVRRQLGDSGRVLALDILEMPPLAGVEFLHGDFREETVLSQFEAMLGGQPVDLVLSDMAPNKSGMDAVDQPRMMHLAELAMDFADNHLKPGGAFLIKLFQGVGFDDYVREMRRRYDKVVIRKPEASRKRSPEVYALGQGKRPQIK*