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SCN18_10_11_15_R1_P_scaffold_2766_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(709..1710)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 321.0
  • Bit_score: 567
  • Evalue 9.30e-159
mraW; rRNA small subunit methyltransferase H (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 326.0
  • Bit_score: 560
  • Evalue 2.30e-157
16S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304D825 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 321.0
  • Bit_score: 566
  • Evalue 1.50e-158

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGAGCCGGGGTGCCCGGGTGCGCGGTCAAGCGCAGGCCGGTCACCCTCCGGTGTCGCAGCCGCCGGCGGCTCACCTGCCGGTGCTGTACACCCAGGTCCTGCAGGGCCTGAGGGTGATCGAAGACGGTACCTATCTGGACGGCACGTTCGGCCGTGGCGGCCACGCCGGCGGCGTGCTGCGCCAGCTCGGTCCCCATGGCCGCCTGCTGGTGATGGACAAGGATCCGGAGGCCATTGCCGTGGCCGAGCGCGATTTCGCGCCGGACCCGCGCGTGGCGATCCATCGCGGCAGCTTCGCCGACCTGCTGGACTGGAGCGAGACCGCCTCCGGGCTGGACGGCGTGCTGTTCGATCTGGGCGTGTCCTCGCCGCAGCTGGACGTGGCCGAGCGCGGTTTCAGCTTCGGCAAGGACGGCCCGCTGGACATGCGCATGGACCCGGATTCGGGCGAGAGCGCGGCGCAGTGGCTCAACCGCGCCGAGGAGCGCGAGATCGCCGACGTGCTGTGGACCTACGGCGAGGAGCGCCAGAGCCGCCGCATCGCCCGCGCCATCGTGGCCCGCCGTGCGAACCAGCCGTTTTCCCGCACCGCCGAGCTGGCCGAGCTGATCGCATCGGCGATGCCGCGCGGCAAGGACAAGATCCATCCGGCCACGCGCAGCTTCCAGGCCATCCGCATCCACATCAACCGCGAACTGGCCGACCTCGAGGCCGGGCTGGACGCGGCGATGGCGCGGCTCAAGCCCGGTGGCCGGCTGGCGGTGATCAGCTTCCATTCGCTGGAAGACCGCATCGTCAAGCAGTTCATGAACCGCTATGCCAAGGCGCCGCCGAGCAACCGCCGGCTGCCGGAAGTGCAGGCCTTCGTGCCGACGCTGGACCTGGTCGGTGGCGCCATCAAGGCCGAGGACGACGAGCTGGCGGCCAACCCGCGTTCGCGCAGCGCGGTGCTGCGGGTGGCGGAAAAGCGCGCGCCGGCCACCGGGGGAGGCGCCGCATGA
PROTEIN sequence
Length: 334
VSRGARVRGQAQAGHPPVSQPPAAHLPVLYTQVLQGLRVIEDGTYLDGTFGRGGHAGGVLRQLGPHGRLLVMDKDPEAIAVAERDFAPDPRVAIHRGSFADLLDWSETASGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWLNRAEEREIADVLWTYGEERQSRRIARAIVARRANQPFSRTAELAELIASAMPRGKDKIHPATRSFQAIRIHINRELADLEAGLDAAMARLKPGGRLAVISFHSLEDRIVKQFMNRYAKAPPSNRRLPEVQAFVPTLDLVGGAIKAEDDELAANPRSRSAVLRVAEKRAPATGGGAA*