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SCN18_10_11_15_R1_P_scaffold_2884_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2044..2439

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 133.0
  • Bit_score: 199
  • Evalue 1.90e-48
TRAP transporter solute receptor {ECO:0000313|EMBL:KFC63914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 133.0
  • Bit_score: 209
  • Evalue 2.50e-51
TRAP dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 133.0
  • Bit_score: 197
  • Evalue 2.00e-48

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGAAGCGTCGTCATTTTCTGGGAGTTGCCGGGGCCGGAACCGCAGGAGCGATTGCGAGCCCCGCGATCGCACAAGCGATGCCCGAGGTGAAATGGCGCATCACCTCCTCCTTCCCAAAATCGCTCGACACGATCTTCGGCGCCTCCGAGGTGCTGGCGAAGGCAGTCTCCGAGGCGACCGACGGCAAGTTCGAAATCCAGGTCTTCGCCCCCGGCGAGATCGTGCCCGGCCTGCAGGCGCTCGACGCCGTCTCGTCCGGCACGGTCGAATGCGCGCATTCGCCGACCTATTTCTACATCGGCAAGGACCCGACGCTGGGTCTGGGCACCGGCAGCCCGTTCGGGCTCAACGCCCGCCAGCAGCATAGCTGGTGGTATTTCGGCGGCGGCGAGCAG
PROTEIN sequence
Length: 132
MKRRHFLGVAGAGTAGAIASPAIAQAMPEVKWRITSSFPKSLDTIFGASEVLAKAVSEATDGKFEIQVFAPGEIVPGLQALDAVSSGTVECAHSPTYFYIGKDPTLGLGTGSPFGLNARQQHSWWYFGGGEQ