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SCN18_10_11_15_R1_P_scaffold_3021_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1599..2186

Top 3 Functional Annotations

Value Algorithm Source
2''''-5'''' RNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B322B6 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 193.0
  • Bit_score: 213
  • Evalue 1.10e-52
2'-5' RNA ligase {ECO:0000313|EMBL:EGD19181.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 3.20e-50
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 194.0
  • Bit_score: 200
  • Evalue 2.70e-49

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACGAAGTTCATTCCCTCCGCCGAGGCGCAGCTGTCGCTGGGCCTGGGCAGCGACATTCCCACCGAACGCCTGTTCTTCGCGGTGATGCCCGATCCGGCCACGGCCTGGCGCATCGCCGAACTGGCCGAGGGACTGCGCGGCGAACATGGCCTGGACGGGCGTCCGCTGGCGCGCGAACGCCTGCATGTCACCCTGCATCACCTGGGCGATTACGCCGGCCTGCCACCGAGCCTGCTGGCGAAGGTGCAGCAGGCCGCGGCGCGGGTGCGCATGCCGGAATTCGAAGTGTGTTTCGATGAAGTCGGCAGCTTCGCCGGCGGCCGCCAGCATCCGTTCGTGCTGCGCAGCGAGCATGGCGCCGACCTGCTGCAGGGCCTGCACCAGGAGCTCGCGCGCTGTCTGCAGGCCATCGGCAGCCGCCCGGATCCGGGGTTCACGCCGCACCTGACCCTGCTCTACGACAAGCGACGCCTGCCGGTACAGCCGGTGCAGCCGATGCGCTGGCTGGTGCGCGAGTTCGTGCTGATCCGCAGCTACCTGGGTCAGACCCGCTACCAGATGGAAGGGCGCTGGAGCCTGGGCTGA
PROTEIN sequence
Length: 196
MTKFIPSAEAQLSLGLGSDIPTERLFFAVMPDPATAWRIAELAEGLRGEHGLDGRPLARERLHVTLHHLGDYAGLPPSLLAKVQQAAARVRMPEFEVCFDEVGSFAGGRQHPFVLRSEHGADLLQGLHQELARCLQAIGSRPDPGFTPHLTLLYDKRRLPVQPVQPMRWLVREFVLIRSYLGQTRYQMEGRWSLG*